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. Author manuscript; available in PMC: 2012 Sep 1.
Published in final edited form as: Biophys Chem. 2011 Apr 28;158(1):9–20. doi: 10.1016/j.bpc.2011.04.010

Table 1.

Kinetic, thermodynamic, and spectroscopic parameters characterizing the binding of ASFV pol X to the ssDNA oligomers differing by the number of nucleotides, in buffer C (pH 7, 10 °C), containing 50 mM NaCl

ssDNA N KN* (M−1) K1 K2 k2 (s−1) k−2 (s−1) ΔF* F2** F3** ΔH1 kcal/mol ΔS1 cal/mol deg ΔH2 kcal/mol ΔS2 cal/ mol deg
10 (5.8 ± 0.9) × 105 2.0 ± 0.7) × 105 1.9 ± 0.6 155 ± 31 83 ± 16 0.8 ± 0.05 2.30 ± 0.02 1.50 ± 0.05 2.6 ± 0.8 33.3 ± 11 −0.13 ± 0.10 1.7 ± 1.1
14 (1.4 ± 0.3) × 106 5.4 ± 1.8) × 105 1.6 ± 0.5 135 ± 27 84 ± 15 0.7 ± 0.05 1.9 ± 0.05 1.6 ± 0.05 8.6 ± 2.8 59 ± 19 0.10 ± 0.10 1.3 ± 0.6
16 (1.8 ± 0.3) 106 7.2 ± 1.4) × 105 1.1 ± 0.3 105 ± 21 95 ± 19 0.9 ± 0.05 2.1 ± 0.05 1.7 ± 0.05 8.3 ± 2.8 56 ± 18 0.10 ± 0.10 0.5 ± 0.3
20 (4.4 ± 1.1) × 106 (2.5 ± 0.8) × 106 0.8 ± 0.3 80 ± 16 105 ± 21 0.85 ± 0.05 1.78 ± 0.05 1.94 ± 0.05 14.4 ± 4.8 80 ± 27 0.24 ± 0.10 0.40 ± 0.20
*

Determined in independent fluorescence titrations.

**

Values relative to the fluorescence, F0 = 1 of the free DNA oligomers (details in text).