Table 3.
Calculated Chain-B with APS | Exp a | |||
---|---|---|---|---|
Fe1↓Fe2↓Fe3↑Fe4↑ | Fe1↑Fe2↓Fe3↓Fe4↑ | Fe1↑Fe2↓Fe3↑Fe4↓ | ||
Fe1-Fe2 | 2.741 | 2.718 | 2.669 | 2.7 |
Fe1-Fe3 | 2.683 | 2.690 | 2.717 | 2.7 |
Fe1-Fe4 | 2.727 | 2.813 | 2.742 | 2.7 |
Fe2-Fe3 | 2.732 | 2.863 | 2.750 | 2.7 |
Fe2-Fe4 | 2.680 | 2.708 | 2.792 | 2.7 |
Fe3-Fe4 | 2.728 | 2.670 | 2.678 | 2.7 |
Fe1-S1 | 2.304 | 2.205 | 2.303 | 2.3 |
Fe1-S2 | 2.333 | 2.308 | 2.227 | 2.3 |
Fe1-S3 | 2.209 | 2.310 | 2.314 | 2.3 |
Fe2-S1 | 2.313 | 2.308 | 2.221 | 2.3 |
Fe2-S2 | 2.267 | 2.183 | 2.274 | 2.2 |
Fe2-S4 | 2.247 | 2.343 | 2.338 | 2.3 |
Fe3-S1 | 2.178 | 2.267 | 2.271 | 2.2 |
Fe3-S3 | 2.310 | 2.222 | 2.308 | 2.2 |
Fe3-S4 | 2.305 | 2.293 | 2.217 | 2.2 |
Fe4-S2 | 2.193 | 2.273 | 2.285 | 2.3 |
Fe4-S3 | 2.290 | 2.284 | 2.202 | 2.3 |
Fe4-S4 | 2.310 | 2.230 | 2.302 | 2.3 |
Fe1-Sγ-Cys140 | 2.304 | 2.329 | 2.326 | 2.3 |
Fe2-Sγ-Cys139 | 2.293 | 2.325 | 2.315 | 2.3 |
Fe3-Sγ-Cys228 | 2.290 | 2.306 | 2.306 | 2.3 |
Fe4-Sγ-Cys231 | 2.257 | 2.289 | 2.276 | 2.3 |
E | −1446.545 | −1446.291 | −1446.501 | |
NSP(Fe1, Fe2, Fe3, Fe4) | (−3.13, −3.11, 3.12, 3.07) | (3.14, −3.16, −3.12, 3.13) | (3.14, −3.14, 3.17, −3.13) | |
δ(Fe1, Fe2, Fe3, Fe4) | (0.45, 0.45, 0.43, 0.42) | (0.46, 0.45, 0.43, 0.43) | (0.47, 0.46, 0.44, 0.43) | 0.45 18 |
Average δ | 0.44 | 0.44 | 0.45 | |
ΔEQ(Fe1, Fe2, Fe3, Fe4) | (1.08, 0.95, 0.79, −1.03) | (0.87, 1.24, 1.15, 0.70) | (0.85, 1.04, 0.87, 1.23) | 1.12 18 |
Average |ΔEQ| | 0.96 | 0.99 | 1.00 | |
η(Fe1, Fe2, Fe3, Fe4) | (0.33, 0.65, 0.53, 0.88) | (0.78, 0.34, 0.29, 0.62) | (0.89, 0.64, 0.42, 0.33) |
The crystal structure was at 2.7 Å resolution, PDB code: 2GOY.13 Distances are taken from chain-B with substrate binding.