Table 1.
Patterns, animal host, and prevalence of the 21 most prevalent M. bovis and M. caprae spoligotypes isolated in mainland Portugal from 2002 to 2009 (joint results from [8, 15]). The patterns are listed in decreasing order of prevalence.
| Spoligotypes | Animal species | Number of isolates | Percentage of total | ||||
|---|---|---|---|---|---|---|---|
| Cattle | Goat | Sheep | Deer | Boar | |||
| SB0121 | 116 | 10 | 4 | 130 | 22.9 | ||
| SB0119 | 58 | 1 | 6 | 4 | 69 | 12.1 | |
| SB0140 | 29 | 2 | 31 | 5.5 | |||
| SB0886 | 28 | 28 | 4.9 | ||||
| SB1090 | 21 | 1 | 22 | 3.9 | |||
| SB1095 | 21 | 1 | 22 | 3.9 | |||
| SB0157 | 7 | 12 | 3 | 22 | 3.9 | ||
| SB0295 | 19 | 1 | 1 | 21 | 3.7 | ||
| SB1174 | 16 | 3 | 1 | 20 | 3.5 | ||
| SB1264 | 6 | 8 | 6 | 20 | 3.5 | ||
| SB0265 | 9 | 1 | 6 | 3 | 19 | 3.4 | |
| SB1172 | 16 | 2 | 18 | 3.2 | |||
| SB0120 | 12 | 5 | 1 | 18 | 3.2 | ||
| SB0124 | 16 | 16 | 2.8 | ||||
| SB0122 | 2 | 10 | 12 | 2.1 | |||
| SB0134 | 8 | 8 | 1.4 | ||||
| SB1195 | 4 | 4 | 8 | 1.4 | |||
| SB0856 | 4 | 3 | 1 | 8 | 1.4 | ||
| SB1266 | 4 | 3 | 7 | 1.2 | |||
| SB1273 | 6 | 1 | 7 | 1.2 | |||
| SB1483 | 5 | 1 | 6 | 1.1 | |||
| other | 44 | 9 | 3 | 56 | 9.8 | ||