Table 4.
Analysis of the Dallas Heart Study Sequencing Data
| SKAT | C | N | W | VTa | VTPa | |
|---|---|---|---|---|---|---|
| Continuous TG level | 9.5 × 10−5 | 1.9 × 10−3 | 7.2 × 10−5 | 2.3 × 10−4 | 3.5 × 10−4 | 2.0 × 10−5 |
| Dichotomized TG level | 1.3 × 10−4 | 3.2 × 10−2 | 2.2 × 10−3 | 3.1 × 10−3 | 8.6 × 10−3 | 2.1 × 10−3 |
Analysis of the Dallas Heart Study sequencing data with SKAT, the weighted sum burden test (W), the counting-based burden test (N), the CAST method (C), the varying-threshold method (VT), and the Polyphen-score adjusted VT (VTP) method. Beta (1, 25) is used as the weight in the SKAT and the weighted sum test.
p values are estimated on the basis of 106 permutations.