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. 2011 Jul 15;89(1):82–93. doi: 10.1016/j.ajhg.2011.05.029

Table 4.

Analysis of the Dallas Heart Study Sequencing Data

SKAT C N W VTa VTPa
Continuous TG level 9.5 × 10−5 1.9 × 10−3 7.2 × 10−5 2.3 × 10−4 3.5 × 10−4 2.0 × 10−5
Dichotomized TG level 1.3 × 10−4 3.2 × 10−2 2.2 × 10−3 3.1 × 10−3 8.6 × 10−3 2.1 × 10−3

Analysis of the Dallas Heart Study sequencing data with SKAT, the weighted sum burden test (W), the counting-based burden test (N), the CAST method (C), the varying-threshold method (VT), and the Polyphen-score adjusted VT (VTP) method. Beta (1, 25) is used as the weight in the SKAT and the weighted sum test.

a

p values are estimated on the basis of 106 permutations.