Table 1. Experimental genome structure analysis.
Method | Type | Scale | Output | Reference |
RNA FISH | Single cell | Genome-wide | Images | [4] |
DNA FISH | Single cell | Genome-wide | Images | [4] |
High-res. FISH | Single cell | Genome-wide to intermediate (Mb) | Images | [4] |
DamID | Population | Genome-wide | DNA-lamina interactions | [14] |
Hi-C | Population | Genome-wide | Chromatin fiber interactions | [13] |
4C | Population | Genome-wide to intermediate (Mb) | Chromatin fiber interactions | [10], [11] |
5C | Population | Intermediate (Mb) | Chromatin fiber interactions | [12] |
3C | Population | Fine (Kb) | Chromatin fiber interactions | [9] |