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. 2011 Jul 14;7(7):e1002125. doi: 10.1371/journal.pcbi.1002125

Table 1. Experimental genome structure analysis.

Method Type Scale Output Reference
RNA FISH Single cell Genome-wide Images [4]
DNA FISH Single cell Genome-wide Images [4]
High-res. FISH Single cell Genome-wide to intermediate (Mb) Images [4]
DamID Population Genome-wide DNA-lamina interactions [14]
Hi-C Population Genome-wide Chromatin fiber interactions [13]
4C Population Genome-wide to intermediate (Mb) Chromatin fiber interactions [10], [11]
5C Population Intermediate (Mb) Chromatin fiber interactions [12]
3C Population Fine (Kb) Chromatin fiber interactions [9]

Kb, kilobases; Mb, megabases. Table adapted from [3], [47].