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. 2011 Jun 11;27(15):2027–2030. doi: 10.1093/bioinformatics/btr349

Table 1.

Identified pathogens in our samples using SRSA method

Organism Unique Multiple Total Total
hits hits E-value score
Mycoplasma Hyorhinis HUB-1 564 51 0 48 951
Mycoplasma Hyorhinis 12 42 0 1544
Human immunodeficiency virus 1 13 26 0 1138

Unique hits, describes the number of queries that matched only one specific organism. Multiple hits, describes the number of queries in which the organism was one of the organisms matched. Total E-value, the combined E-value of all unique organism hits. Total score, describes the sum of all scores for each organism query hit, with reduced weight for multiple organisms hits score.