Table 2.

Gene Ontology analysis of the 227 VMRs revealed enrichment for the development and morphogenesis categories (P < 0.01).

P	FDR	Odds ratio	Observed count	Expected count	GO term	Genes
0.0011	0.22	7.04	5	0.79	Anterior/posterior pattern formation	HOXA5, HOXB6, HOXD8, HOXC10, HOXA1
0.0019	0.22	43.31	2	0.07	Blastoderm segmentation	HOXB6, HOXD8
0.0019	0.22	43.31	2	0.07	Determined anterior/posterior axis, embryo	HOXB6, HOXD8
0.0082	0.25	17.31	2	0.14	Neuron recognition	FOXG1, NTM
0.0086	0.25	3.63	6	1.77	Pattern specification process	HOXA5, FOXG1, LEF1, HOXC10, MYF6, HOXA1
0.0096	0.25	7.47	3	0.44	Placenta development	ESX1, LEF1, CDX4
0.0096	0.25	15.74	2	0.15	Intra-Golgi vesicle-mediated transport	COPZ1, GABARAPL2