Table 1.
Summary of TripleTOF Instrument Platform Features and Results
# MS/MS cycles | MS/MS Accumulation Time | Total Cycle Time | # Protein IDs by Protein Pilot(1% FDR)* | # Protein IDs by Mascot (=≥20 score) | # Spectra Acquired | # Spectra Used | # Unique Peptides |
---|---|---|---|---|---|---|---|
8 | 120 ms | 1.25 s | 914 | 764 | 65948 | 29817 | 8897 |
20 | 50 ms | 1.3 s | 1112 | 1132 | 89482 | 46705 | 13927 |
50 | 20 ms | 1.5 s | 1030 | 944 | 99137 | 51078 | 13048 |