Table 3.
Performance comparison on PC data
| Method | COSINE | jAM | Edge | Local |
|---|---|---|---|---|
| No. of nodes selected | 243 | 1669 | 4339 | 230 |
| No. of edges (PPI) selected | 102 | 3283 | 16 576 | 32 |
| No. of PC genes recovered | 23 | 133 | 373 | 18 |
| Fold enrichment | 1.262 | 1.063 | 1.147 | 1.044 |
Fold enrichment is calculated as follows: No. PC genes recovered / (400*No. ofnodes selected/5335).