Table 1. Genes that are rhythmically expressed in the pineal gland.
The genes listed are rhythmically expressed 4-fold or greater during the night or day (Bailey et al., 2009). A listing of all genes that are expressed rhythmically >2-fold is available at http://sne.nichd.nih.gov/data/table_s3.xls, which includes gene descriptions, probe set numbers and Entrez Gene numbers.
Night 8-fold increase | Aanat, Arpp21, Atp7b, Cd24, Cebpb, Cited4, Crem, Cyp1a1, Dclk3*, Dio2, Drd4, Dusp1,Errfi1, Etnk1*, Fcer1a, Fgfr1, Fst, Gdf15, Hspa1a, Irak2, Irs2, Man2a1, Mfrp*, Mt1a, Nap1l5, nod3l, Nr4a1, Nr4a3, Pde10a, Per2, Prlr Ribc2, Slc15a1, Slc6a17, Snf1lk, Sostdc1, St8sia5, Syt4, Wnt10a*, Zrsr1 |
Night 4 to 8-fold increase | Abca1, Ace, Adcy8, Ankrd52*, Anp32a, Atp2b3, Bex1, Btg2, Cacna1g, Camk1g, Ccrl2*, Cd8a, Chst2*, Cip98, Col5a3, Coq10b, Cry2, Dclk1, Ddit3, Dnm2, Dos*, Dsc2, Dscr1, Egf, Emd, Eomes, Fdx1, Folr1, Fosl2, Gadd45b, Galntl1, Gclm, Gem*,Gls, Gls2, Glt8d3, Grm1, Hcrtr1, Hhip, Hspa1b, Hsph1, Igf1r, Igfbp2, Kcnab2, Kctd3, Lamb3, Lcn7, Lphn2 Lrrn3, Lxn, Mat2a, Mcam, Mtac2d1, Nphp4, Padi4, Parvb*, Pcdh1*, Pde4b, Pde4d, Pde8b, Plagl1, Ptch1, PVR, Qscn6, Rab3ip, Reln, Rhobtb3*, Rock2, Scrt1*, Slc12a2, Slc17a6, Slc30a1, Slco1a5, Tbc1d1*, Tjp2, Top1, Tyro3, Xpot*, |
Day 8-fold increase | Ccl9, Hs3st2, Ptpn21 |
Day 4- to 8-fold increase | Cfl2*, Galnt14, Mina, Muc4, Sgk, Sorl1, St8sia3, Tfpi2, Tmed1, Vof16, Wdr89 |
Predicted gene.