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. 2011 Jun 2;286(29):25739–25747. doi: 10.1074/jbc.M110.157859

TABLE 1.

Binding affinities of PIR ectodomains to various ligands

Recombinant ectodomaina KDb
H-2Db HLA-G Nogo-66
μm
PIR-B
    D1–D6 4.0 ± 1.9c (4) 2.4 ± 0.7 (3) 0.57d (1)
    D1D2 29 ± 5 (3) 24 ± 4 (3) 8.5 (1)
    D3–D6 NBe (1) NDf 0.80 (1)

PIR-A
    D1–D6 +g (1) ND 6.9 (2)
    D1D2 ND ND NB (1)
    D3–D6 ND ND 4.3 (2)

a Recombinant extracellular Ig-like domains of PIR (see supplemental Fig. S1A).

b Affinity was determined from the binding data fit to a bivalent analyte model for Fc fusion proteins or to a 1:1 binding model for fusion proteins without Fc.

c Affinity values were determined from the numbers of response units with various concentrations of analytes. Data are presented as the value(s) for either a single determination, the means for two different experiments, or the means ± S.D. for three to four different experiments, the number of experiments are given in parentheses. The KD value of PIR-B–H-2Db binding was larger than that reported previously (6), possibly due partly to the fact that in our previous SPR analysis, we employed the H-2 α chain complexed with human β2m to ensure the stability of the complex, and we calculated the KD at lower concentrations of anlayte than the current analysis.

d The KD value is larger than that reported previously (13), possibly due to the difference in the assay methods: Atwal et al. (13) employed an enzyme-linked immunosorbent assay.

e NB, no binding detected.

f ND, not done.

g Binding was detected with a fixed concentration of an analyte.