Table 3.
List of downregulated proteins in the wild-type BY4741 strain
| Protein ID | ORF Name | Common Name | Δrsm22 | Δnsr1 | Δrpl20a |
|---|---|---|---|---|---|
| Ribosome and related proteins | |||||
| gi 6322681 | YKL167C | MRP49 | down | ||
| gi 6324451 | YOL121C | RPS19A | |||
| gi 895891 | YJR123W | RPS5 | |||
| gi 6321653 | YGR214W | RPS0A | |||
| gi 927770 | YDR500C | RPL37B | down | ||
| gi 927724 | YDR447C | RPS17B; RPS17A | |||
| gi 6325006 | YPL249C-A | RPL36B | |||
| gi 6322272 | YJL189W | RPL39 | down | ||
| gi 6320122 | YDL081C | RPP1A | |||
| gi 6320073 | YDL130W | RPP1B | |||
| gi 6324534 | YOL039W | RPP2A | up | ||
| gi 927315 | YDR382W | RPP2B | |||
| gi 6324433 | YOL139C | CDC33 | |||
| gi 992578 | YAL003W | EFB1 | down | ||
| gi 6320801 | YEL034W | HYP2 | down | down | |
| gi 6322794 | YKL056C | ||||
| gi 6323953 | YMR295C | ||||
| Protein folding and stabilization | |||||
| gi 6323562 | YML078W | CPR3 | down | ||
| gi 854502 | YNL135C | FPR1 | up | ||
| gi 6324806 | YOR232W | MGE1 | |||
| gi 940372 | YOR265W | RBL2 | up | ||
| gi 731762 | YHR193C | EGD2 | |||
| Protein transport | |||||
| gi 6324344 | YNR017W | MAS6 | |||
| gi 731508 | YER120W | SCS2 | |||
| gi 836710 | YFL045C | SEC53 | |||
| gi 730698 | YLR250W | SSP120 | |||
| gi 6321519 | YGR082W | TOM20 | down | ||
| RRRRRgi 46562125 | YOR069W | VPS5 | |||
| Metal ion binding | |||||
| gi 6323326 | YLR295C | ATP14 | down | ||
| gi 6319426 | YBL045C | COR1 | down | ||
| gi 6321846 | YHR053C | CUP1-1; CUP1-2 | down | ||
| RRRRRgi 6322803 | YKL048C | ELM1 | |||
| gi 805042 | YPR062W | FCY1 | down | ||
| gi 6729856 | YBR011C | IPP1 | |||
| gi 729984 | YER003C | PMI40 | |||
| gi 6321251 | YGL187C | COX4 | down | ||
| gi 6321842 | YHR051W | COX6 | up | ||
| gi 6322531 | YJR070C | LIA1 | |||
| gi 6980688 | YJR104C | SOD1 | down | down | down |
| gi 88984161 | YGR234W | YHB1 | down | ||
| gi 984175 | YDR143C | SAN1 | down | ||
| Oxidation reduction | |||||
| gi 731458 | YER042W | MXR1 | |||
| gi 6319407 | YBL064C | PRX1 | up | up | |
| gi 836788 | YFR033C | QCR6 | down | down | |
| gi 6322633 | YKL216W | URA1 | up | ||
| gi 731693 | YHR104W | GRE3 | |||
| Others | |||||
| gi 6320240 | YDR035W | ARO3 | |||
| gi 73921293 | YOL109W | ZEO1 | down | down | |
| gi 6324298 | YNL030W | – | down | ||
| gi 9864778 | YOR240W | – | |||
| gi 728682 | YDR226W | ADK1 | |||
| gi 18266826 | YCL050C | APA1 | |||
| gi 731820 | YIL062C | ARC15 | |||
| gi 728968 | YER177W | BMH1 | |||
| gi 74676483 | YPL178W | CBC2 | down | ||
| gi 83578104 | YOR074C | CDC21 | |||
| gi 6324328 | YNR001C | CIT1 | |||
| gi 6319585 | YBR109C | CMD1 | up | ||
| gi 664873 | YLR429W | CRN1 | |||
| gi 798919 | YDR068W | DOS2 | |||
| gi 974204 | YBR078W | ECM33 | |||
| gi 6319655 | YBR177C | EHT1 | down | down | |
| gi 6323112 | YLR083C | EMP70 | |||
| gi 6319814 | YCL035C | GRX1 | up | up | |
| gi 927781 | YDR513W | GRX2 | down | ||
| gi 731801 | YIL041W | GVP36 | down | ||
| gi 74655018 | YDL223C | HBT1 | |||
| gi 6319439 | YBL032W | HEK2 | down | ||
| gi 6324297 | YNL031C | HHT2 | |||
| gi 731467 | YER057C | HMF1 | |||
| gi 728681 | YDR225W | HTA1 | down | ||
| gi 6320020 | YDL181W | INH1 | down | down | |
| gi 731523 | YER146W | LSM5 | |||
| gi 965089 | YPL004C | LSP1 | down | down | down |
| gi 6320071 | YDL131W | LYS21 | down | ||
| gi 6321332 | YGL106W | MLC1 | down | ||
| gi 791112 | YNL074C | MLF3 | down | ||
| gi 731437 | YER009W | NTF2 | up | down | |
| gi 730269 | YIR006C | PAN1 | |||
| gi 755798 | YGR193C | PDX1 | |||
| gi 6319441 | YBL030C | PET9 | down | down | |
| gi 6321523 | YGR086C | PIL1 | down | ||
| gi 6320798 | YEL037C | RAD23 | |||
| gi 6322288 | YJL173C | RFA3 | |||
| gi 83754253 | YOL005C | RPB11 | |||
| gi 6320106 | YDL097C | RPN6 | down | ||
| gi 83754248 | YPR187W | RPO26 | down | ||
| gi 6319854 | YCR009C | RVS161 | down | ||
| gi 6325038 | YPL218W | SAR1 | up | ||
| gi 6320049 | YDL153C | SAS10 | down | ||
| gi 74676529 | YOR007C | SGT2 | |||
| gi 886922 | YGR229C | SMI1 | |||
| gi 731411 | YEL026W | SNU13 | down | ||
| gi 119389383 | YML010W YGR063C | SPT5 | up | ||
| gi 3417405 | YDL185W | TFP1 | |||
| gi 6323072 | YLR043C | TRX1 | up | up | |
| gi 914876 | YDR092W | UBC13 | |||
| gi 6322828 | YKL024C | URA6 | |||
| gi 731777 | YIL008W | URM1 | down | ||
| gi 6324907 | YOR332W | VMA4 | |||
| gi 836758 | YFR003C | YPI1 | up | up | |
| gi 6320589 | YDR381W | YRA1 | |||
| gi 6324221 | YNL108C | up | |||
| gi 33438776 | YCR075W-A | ||||
| gi 74676469 | YOR051C | ||||
| gi 6325072 | YPL184C | ||||
| gi 790501 | YGR210C | ||||
| gi 786320 | YPR172W | ||||
| gi 33438816 | YIL002W-A | ||||
| gi 74676371 | YLR287C | ||||
| gi 798921 | YDR070C | ||||
Those proteins that were upregulated or downregulated in the mutant strains are indicated.