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. Author manuscript; available in PMC: 2012 Oct 1.
Published in final edited form as: J Arid Environ. 2011 Oct;75(10):917–925. doi: 10.1016/j.jaridenv.2011.04.028

Table 1.

Predicted species richness for Bacteria and Fungi and quantitative PCR of total bacterial or Gram-positive 16S rDNA in Larrea rhizosphere soil exposed to elevated or ambient [CO2].

Phylogeny [CO2] No. of sequencesa Observed No. of phylotypesb Chao1 (SD)c QPCR mean nanogram DNA per gram of fine roots SD (Ratio Ambient to Elelvated)
Total Gram-pos
Bacteria Ambient 199 130 522 (343, 853) 2.53 ±0.37 (1.10) 34.02 ±6.69 (1.77)
Elevated 208 164 535 (385, 788) 2.29 (±0.18) 19.20 (±3.65)
Fungi Ambient 189 15 16 (15, 22) N.D. N.D.
Elevated 182 49 64 (54, 92) N.D. N.D.
a

The number of sequences used to calculate the species richness.

b

The number of identified phylotypes (or OTUs) detected at 97% sequence similarity cut-off.

c

Relative richness employing the Chao1 (Chao, 1984) richness estimator, using single linkage clustering and 97% sequence similarity cutoff, for microbial communities under the different CO2 treatments. (SD) = Standard deviations

N.D. = not done