. Author manuscript; available in PMC: 2012 Jul 29.

Published in final edited form as: J Mol Biol. 2011 Jul 29;410(5):1065–1076. doi: 10.1016/j.jmb.2011.03.058

Table III.

Vif-derived peptides^a

NIH S.#	FROM	TO	PEPTIDE SEQUENCE	NIH S.#	FROM	TO	PEPTIDE SEQUENCE
6018	1	15	MENRWQVMIVWQVDR	6041	93	107	RYSTQVDPDLADQLI
6019	5	19	WQVMIVWQVDRMRIR	6042	97	111	QVDPDLADQLIHLYY
6020	9	23	IVWQVDRMRIRTWKS	6043	101	115	DLADQLIHLYYFDCF
6021	13	27	VDRMRIRTWKSLVKH	6044	105	119	QLIHLYYFDCFSESA
6022	17	31	RIRTWKSLVKHHMYI	6045	109	123	LYYFDCFSESAIRNA
6023	21	35	WKSLVKHHMYISGKA	6046	113	127	DCFSESAIRNAILGH
6024	25	39	VKHHMYISGKAKGWF	6047	117	131	ESAIRNAILGHIVSP
6025	29	43	MYISGKAKGWFYRHH	6048	121	135	RNAILGHIVSPRCEY
6026	33	47	GKAKGWFYRHHYEST	6049	125	139	LGHIVSPRCEYQAGH
6027	37	51	GWFYRHHYESTHPRI	6050	129	143	VSPRCEYQAGHNKVG
6028	41	55	RHHYESTHPRISSEV	6051	133	147	CEYQAGHNKVGSLQY
6029	45	59	ESTHPRISSEVHIPL	6052	137	151	AGHNKVGSLQYLALA
6030	49	63	PRISSEVHIPLGDAR	6053	141	155	KVGSLQYLALAALIT
6031	53	67	SEVHIPLGDARLVIT	6054	45	59	QYLALAALITPKKI
6032	57	71	IPLGDARLVITTYWG	6055	149	163	ALAALITPKKIKPPL
6033	61	75	DARLVITTYWGLHTG	6056	153	167	LITPKKIKPPLPSVT
6034	65	79	VITTYWGLHTGERDW	6057	157	171	KKIKPPLPSVTKLTE
6035	69	83	YWGLHTGERDWHLGQ	6058	161	175	PPLPSVTKLTEDRWN
6036	73	87	HTGERDWHLGQGVSI	6059	165	179	SVTKLTEDRWNKPQK
6037	77	91	RDWHLGQGVSIEWRK	060	169	183	LTEDRWNKPQKTKGH
6038	81	95	LGQGVSIEWRKKRYS	6061	173	187	RWNKPQKTKGHRGSH
6039	85	99	VSIEWRKKRYSTQVD	6062	177	191	PQKTKGHRGSHTMNG
6040	89	103	WRKKRYSTQVDPDLA	6063	181	192	KGHRGSHTMNGH

Fifteen-mer peptides derived from HIV-1 Vif (sequence accession: #AAZ14773) covering the full-length protein with 11aa overlaps.