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. 2011 Jul 19;6(7):e22296. doi: 10.1371/journal.pone.0022296

Table 1. Occurrence frequencies (%) of possible NoLS sequences (K/R-K/R-X-K/R) and of the twenty aminoacids at the X position in several NoLS-containing nucleolar proteins.

Motif KKXK KKXR KRXK KRXR RRXR RRXK RXKR RKXK OFa MFb OF/MF
Res. X
G 4.84 - - - - - - - 4.84 7.4 0.65
A 1.61 - - - - - - - 1.61 7.4 0.22
V 1.61 - - - - - - - 1.61 6.8 0.24
L 3.23 - - - - - 1.61 - 4.84 7.6 0.64
I - - - 1.61 - - - - 1.61 3.8 0.42
P 3.23 - - 1.61 4.84 - - - 9.68 5.0 1.94
S - - 1.61 1.61 3.23 - - - 6.45 8.1 0.8
T 1.61 - - - - - - - 1.61 6.2 0.26
C - - - - - - - - 0.00 3.3 0.00
M - - - - - 1.61 - - 1.61 1.8 0.90
N 6.65 - 1.61 3.23 6.45 - - - 17.74 4.4 4.03
Q - 1.61 - - 3.23 - - - 4.84 3.7 1.31
F - - - - 1.61 1.61 - - 3.23 4.0 0.81
Y - - - - - - - - 0.00 3.3 0.00
W - - - - 1.61 - - - 1.61 1.3 1.24
D - - - - - - - - 0.00 5.9 0.00
E - - - - - - - - 0.00 5.8 0.00
K 6.45 4.84 - - 3.23 - 1.61 - 16.13 7.2 2.24
R - 3.23 1.61 - 17.74 - - - 22.60 4.2 5.38
H - - - - - - - - 0.00 2.9 0.00
29.03 9.68 4.84 8.06 41.93 3.23 3.23 0.00
51.61 48.39
a

Among the eight possible sequence combinations (upper line), observed frequency (OF) of each aminoacid at the X position in NoLS present in 61 well-characterized nucleolar proteins and using for the analysis.

b

Mean frequency (MF) of each aminoacid observed in vertebrate proteins.