Table III. Kinetic parameters of wild-type reverse transcriptase for thymidine nucleotide analogues.
TTP | AZT triphosphate |
d4T triphosphate |
|||
---|---|---|---|---|---|
– | α-borano | – | α-borano | ||
Km (µM)a | 1.7 | 2.4 | 0.2 | 1.2 | 0.44 |
kcat (s–1)a | 0.05 | 0.08 | 0.06 | 0.055 | 0.056 |
kcat/Km (µM–1s–1) | 0.029 | 0.033 | 0.30 | 0.046 | 0.127 |
KD (µM)b | 11c | 7.1 | 7.6 | 21.3 | 18.7 |
kpol (s–1)b | 5.4c | 12.8 | 18.4 | 10.8 | 16 |
kpol/KD (µM–1s–1) | 0.49c | 1.8 | 2.4 | 0.51 | 0.85 |
aA single-nucleotide incorporation and gel assay was used as described (Reardon and Miller, 1990) except that incubations were at 37°C, and the heteropolymeric DNA primer–template system as described (Canard et al., 1998). Km and kcat were obtained using Lineweaver–Burk or Eadie–Hofstee plots in which values of correlation coefficients were >0.98.
bKD and kpol were obtained as described in Figure 5 (Kati et al., 1992). Standard deviations were <16%.
cDeterminations carried out at 25°C and taken from Reardon and Miller (1990).