Table 2.
Functional categories of SRF-modulated genes. Each of the 207 SRF-modulated genes was assigned to one of 12 categories. 56 genes contained classic CArG elements, 136 genes contained CArG-like elements, 15 genes did not have both elements, or there are not sufficient data to show that they had either element.
| Category | CArG | CArG-like | Without CArG/CArG-like*, or insufficient data |
|---|---|---|---|
| 1. Energy metabolism | 4 | 10 | 1 |
| 2. Xenobiotic metabolism | 4 | 7 | |
| 3. Cytoskeleton | 8 | 9 | |
| 4. Transcription and translation | 7 | 20 | 3 |
| 5. Extracellular matrix | 2 | 10 | |
| 6. Stress response | 2 | 10 | |
| 7. Signaling proteins | 7 | 24 | 2 |
| 8. Proteases, and protease inhibitors | 5 | 6 | |
| 9. Complement and coagulation | 0 | 6 | 1 |
| 10. Ion transport | 3 | 8 | |
| 11. Immune response | 1 | 6 | 4 |
| 12. Other proteins | 13 | 20 | 4 |
| Total | 56 | 136 | 15 |