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. 2011 Jul 20;6(7):e20432. doi: 10.1371/journal.pone.0020432

Table 1. ALAD tagging Single Nucleotide Polymorphisms (SNPs) evaluated in the Central Eastern European Renal Cancer Study.

Chromosome location Location of Nucleotide Change Amino Acid Change dbSNP ID Minor allele frequency in control population Assay (Golden Gate or Taqman)
9q33 g.-22966C>T rs14419 0.36 GoldenGate
g.-19563T>A rs818694 0.30 GoldenGate
9q32 g.IVS1+1425G>C rs818688 0.37 GoldenGate
g.IVS1+2615G>T rs818687 0.18 GoldenGate
g.IVS1−3185G>A rs2792818 0.17 GoldenGate
g.IVS2+299C>T rs8177796 0.08 GoldenGate
g.IVS3−196G>A rs8177800 0.08 GoldenGate
Ex4+13G>C K68N rs1800435 0.08 Taqman
g.IVS4−139G>A rs2761016 0.44 GoldenGate
g.Ex6+17C>T N147N rs2228083 0.11 GoldenGate
g.IVS11+66T>C rs1805313 0.38 GoldenGate
g.Ex12+533C>T rs818708 0.44 GoldenGate
g.Ex12+675G>A rs818707 0.10 GoldenGate
g.Ex12+100C>G rs818705 0.18 GoldenGate
g.Ex12+277C>T rs818704 0.13 GoldenGate
g.Ex12+352C>T rs7042485 0.29 GoldenGate
g.6440T>C rs16933168 0.16 GoldenGate
g.7758C>T rs16936474 0.16 GoldenGate
g.8429C>G rs3750526 0.09 GoldenGate