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. 2011 Jul 22;6(7):e22298. doi: 10.1371/journal.pone.0022298

Table 1. Molecular diversity indices and tests of neutrality for Pax-C and β-tubulin.

Na H s h p k Tajima's D Fu's Fs
Pax-C
F. fragum 454 bp
CA1 - Panama 32 3 2 0.619 ± 0.044 0.0016 ± 0.0014 0.724 ± 0.555 1.535 0.886
F. gravida 454 bp
BR1 - Abrolhos 26 2 1 0.492 ± 0.051 0.0011 ± 0.0011 0.492 ± 0.436 1.437 1.523
BR2 - João Pessoa 46 2 1 0.394 ± 0.063 0.0009 ± 0.0009 0.394 ± 0.375 1.006 1.407
WA1 - São Tome 40 1 0 0 0 0 0 0
S. radians 367 bp
CA1 - Panama 21 5 5 0.491 ± 0.127 0.0033 ± 0.0024 1.210 ± 0.803 −0.213 −0.565
BR1 - Abrolhos 14 2 4 0.528 ± 0.064 0.0058 ± 0.0038 2.110 ± 1.250 2.232 4.844
BR2 - João Pessoa 27 5 8 0.735 ± 0.059 0.0090 ± 0.0053 3.293 ± 1.748 1.610 2.968
BR3 - Fortaleza 20 3 5 0.653 ± 0.065 0.0058 ± 0.0037 2.105 ± 1.225 1.511 3.402
WA1 - São Tome 44 5 8 0.571 ± 0.052 0.0061 ± 0.0038 2.229 ± 1.253 0.896 2.316
S. siderea 366 bp
CA1 - Panama 27 8 13 0.863 ± 0.035 0.0090 ± 0.0053 3.288 ± 1.745 −0.085 0.156
BR2 - João Pessoa 29 3 4 0.493 ± 0.093 0.0028 ± 0.0022 1.034 ± 0.710 0.041 1.676
BR3 - Fortaleza 20 5 9 0.600 ± 0.101 0.0042 ± 0.0029 1.542 ± 0.963 −1.348 −0.007
WA1 - São Tome 36 2 3 0.108 ± 0.068 0.0009 ± 0.0010 0.324 ± 0.335 −1.237 0.939
β-tubulin
F. fragum 939 bp
CA1 - Panama 36 4 5 0.533 ± 0.088 0.0014 ± 0.0010 1.321 ± 0.842 0.248 1.340
F. gravida 939 bp
BR1 - Abrolhos 38 2 1 0.235 ± 0.081 0.0003 ± 0.0003 0.235 ± 0.278 −0.020 0.455
BR2 - João Pessoa 52 3 3 0.604 ± 0.034 0.0013 ± 0.0009 1.190 ± 0.775 1.623 2.695
WA1 - São Tome 40 3 2 0.650 ± 0.038 0.0008 ± 0.0007 0.788 ± 0.585 1.278 1.260
S. radians 665 bp
CA1 - Panama 20 8 22 0.837 ± 0.051 0.0158 ± 0.0084 10.505 ± 4.999 2.631 3.722
BR1 - Abrolhos 6 4 6 0.867 ± 0.129 0.0048 ± 0.0033 3.200 ± 1.918 1.246 0.352
BR2 - João Pessoa 14 4 6 0.495 ± 0.151 0.0017 ± 0.0013 1.099 ± 0.765 −1.499 −0.214
BR3 - Fortaleza 14 3 2 0.703 ± 0.062 0.0013 ± 0.0011 0.879 ± 0.654 1.080 0.586
WA1 - São Tome 40 5 6 0.677 ± 0.042 0.0021 ± 0.0014 1.363 ± 0.860 −0.090 0.531
S. siderea 665 bp
CA1 - Panama 38 32 34 0.986 ± 0.011 0.0119 ± 0.0063 7.933 ± 3.771 −0.130 −21.883
BR1 - Abrolhos 10 7 15 0.933 ± 0.062 0.0087 ± 0.0051 5.778 ± 3.020 0.413 −0.394
BR2 - João Pessoa 38 19 21 0.926 ± 0.028 0.0079 ± 0.0043 5.266 ± 2.602 0.180 −5.479
BR3 - Fortaleza 24 8 16 0.844 ± 0.044 0.0062 ± 0.0036 4.152 ± 2.140 −0.110 0.657
WA1 - São Tome 40 5 5 0.236 ± 0.088 0.0005 ± 0.0006 0.342 ± 0.346 −1.804 −3.315
P. astreoides 596 bp
CA1 - Panama 24 4 10 0.728 ± 0.045 0.0078 ± 0.0044 4.649 ± 2.361 2.455 5.884
BR2 - João Pessoa 42 4 12 0.628 ± 0.041 0.0085 ± 0.0047 5.087 ± 2.518 2.515 8.829

Na is the number of sampled alleles, H is the number of unique haplotypes observed, s is the number of segregating sites, h is the gene diversity, π is the average nucleotide diversity and k is the average number of nucleotide differences. Biogeographic regions are denoted as CA for Caribbean, BR for Brazil and WA for West Africa. Statistically significant values (α = 0.05) are highlighted in bold.