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. 2011 Jul 22;6(7):e22636. doi: 10.1371/journal.pone.0022636

Table 1. Polymorphisms in human ALK significantly associated with altered behavioral responses to alcohol.

SNP ID MAF SNP Position Amino Acid Phenotype Genotypes Tested n Value p-value q-value
rs56132472 0.10 Exon 29 T1446T BSL HOM1 vs. HET 329 0.39 0.0011 0.0310
rs17007646 0.13 Intron 28 non-coding BSL HOM1 vs. HET 330 0.33 0.0028 0.0387
rs1881421 0.42 Exon 29 D1529E BSL HOM1 vs. HET 323 0.24 0.0126 0.1159
rs17007646 0.13 Intron 28 non-coding BSA HOM1 vs. HOM2 329 0.48 0.0255 0.1245
rs56132472 0.10 Exon 29 T1446T BSA HOM1 vs. HET 328 0.25 0.0269 0.1245
rs4622670 0.30 Intron 20 non-coding SHAS HOM1 vs. HOM2 326 −0.40 0.0270 0.1245
rs17007646 0.13 Intron 28 non-coding SHAS HOM1 vs. HOM2 333 0.53 0.0434 0.1716

Columns (from left to right) show the single nucleotide polymorphism identifier (SNP ID), minor allele frequency (MAF), the position of the polymorphism in ALK (SNP position), the amino acid change in the ALK protein (Amino Acid), the associated alcohol-related phenotype (Phenotype), the genotypic classes compared for association (Genotypes Tested), the number of subjects in the statistical test (n), the quantitative effect of being homozygous for the common allele vs. the other genotypic classes in the previous column, expressed in standard deviations (Value), the p-value rejecting the null hypothesis (genotype does not affect phenotype, p -value), and the FDR q-value multiple test correction.