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. Author manuscript; available in PMC: 2012 Oct 1.
Published in final edited form as: J Comput Chem. 2011 Jul 6;32(13):2909–2923. doi: 10.1002/jcc.21876

Table 2.

Functional groups designated by Checkmol43 and their frequency of representation in the database of 499 compounds. (ca=carboxylic acid)

Group No. Group No.
acetal 2 ether_alkyl 25
acid 6 ether_aryl 10
alcohol 38 fluoro 10
aldehyde 19 halogen 22
alkane 27 heterocyclic 48
alkene 35 hypervalents 4
alkyne 6 iodo 11
amine 44 ketone 25
aromatic 169 nitro 17
bromo 21 nitrogen 2
ca_amide 10 orthoester 8
ca_ester 47 other 8
ca_ortho 10 phenol 33
carbonitrile 11 sulfur 4
chloro_alkyl 31 thioether 6
chloro_aryl 20 thiol 5
cyclohydrocarbon 9