Table 9.
A list of FB CIFH contigs with BLAST hits*
| CIFH contig # | Original read # | RA or ARN | BLAST results | |||||
|---|---|---|---|---|---|---|---|---|
| CF | CH | IF | IH | Total | CF/CH | IF/IH | ||
| 00051 | 291 | 1 | 329 | 0 | 621 | 1403.9 | 681.6 | gi|183979376|dbj|BAG30740.1| muscle myosin heavy chain [Papilio xuthus] |
| 00153 etc. | 2069 | 4 | 2563 | 1 | 4637 | 2495.3 | 5309.8 | gi|2498144|sp|Q25490.1 apoLp (00153 02405 02406 03748 04510 06831 06834 07770 14087 14589) |
| 00194 | 37 | 0 | 81 | 1 | 119 | 178.5 | 167.8 | gi|48476133|gb|AAT44358.1| calcium-activated potassium channel α subunit [Manduca sexta] |
| 00285 & | 298 | 23 | 921 | 5 | 1247 | 62.5 | 381.6 | gi|73921301|gb|AAG42021.2|AF327882_1 JHE precursor [Manduca sexta] (00285, 00859) |
| 00409 | 168 | 0 | 216 | 0 | 384 | 810.5 | 447.5 | gi|110750043|ref|XP_394261.3| plexin A CG11081-PA, isoform A [Apis mellifera] |
| 00414 | 58 | 1 | 50 | 0 | 109 | 279.8 | 103.6 | gi|195382713|ref|XP_002050074.1| GJ21937 [Drosophila virilis] |
| 00423 | 149 | 0 | 220 | 0 | 369 | 718.8 | 455.8 | gi|158295580|ref|XP_316291.4| AGAP006225-PA [Anopheles gambiae] |
| 00465 | 134 | 1 | 230 | 0 | 365 | 646.4 | 476.5 | gi|149755131|ref|XP_001491560.1| hemicentin 1 [Equus caballus] |
| 00535 | 67 | 1 | 100 | 0 | 168 | 323.2 | 207.2 | gi|242015135|ref|XP_002428229.1| thrombospondin-3 precursor [Pediculus humanus corporis] |
| 00575 | 3 | 0 | 259 | 5 | 267 | 14.5 | 107.3 | gi|154240658|dbj|BAF74637.1| peptidoglycan recognition protein-D [Samia cynthiaricini] |
| 00609 | 324 | 0 | 762 | 0 | 1086 | 1563.1 | 1578.6 | gi|225542786|gb|ACN91276.1| dentin sialophosphoprotein precursor [Bos taurus] |
| 00737 | 2 | 4 | 131 | 2 | 139 | 2.4 | 135.7 | gi|198466442|ref|XP_002135189.1| GA23919 [Drosophila pseudoobscura] |
| 00748 | 131 | 4 | 118 | 2 | 255 | 158.0 | 122.2 | gi|29346557|ref|NP_810060.1| glycine dehydrogenase [Bacteroides thetaiotaomicron] |
| 00766 | 45 | 0 | 74 | 1 | 120 | 217.1 | 153.3 | gi|158293377|ref|XP_314728.3| AGAP008632-PA [Anopheles gambiae] |
| 00773 | 49 | 12 | 93 | 1 | 155 | 19.7 | 192.7 | gi|157103945|ref|XP_001648193.1| dihydropyrimidine dehydrogenase [Aedes aegypti] |
| 00785 | 120 | 2 | 139 | 2 | 263 | 289.5 | 144.0 | gi|193795848|gb|ACF21977.1| paramyosin [Bombyx mandarina] |
| 00884 | 39 | 1 | 23 | 0 | 63 | 188.1 | 47.6 | gi|156553304|ref|XP_001599652.1| GA21752-PA [Nasonia vitripennis] |
| 00960 | 52 | 2 | 99 | 1 | 154 | 125.4 | 205.1 | gi|157107996|ref|XP_001650030.1| sarcosine dehydrogenase [Aedes aegypti] |
| 01095 | 64 | 0 | 99 | 1 | 164 | 308.8 | 205.1 | gi|169639235|gb|ACA60733.1| venom acid phosphatase [Pteromalus puparum] |
| 01097 | 134 | 2 | 436 | 5 | 577 | 323.2 | 180.7 | gi|55139125|gb|AAV41236.1| immulectin-3 [Manduca sexta] |
| 01127 | 41 | 1 | 52 | 1 | 95 | 197.8 | 107.7 | gi|189491898|gb|ACE00761.1| adipokinetic hormone receptor [Manduca sexta] |
| 01454 | 599 | 3 | 1337 | 3 | 1942 | 963.2 | 923.3 | gi|91082539|ref|XP_973726.1| inter-α (globulin) inhibitor H4 (Kallikrein-sensitive) [T. castaneum] |
| 01480 | 211 | 0 | 729 | 0 | 940 | 1017.9 | 1510.3 | gi|183979392|dbj|BAG30748.1| hypothetical protein [Papilio xuthus] |
| 01601 | 60 | 1 | 79 | 0 | 140 | 289.5 | 163.7 | gi|270005801|gb|EFA02249.1| hypothetical protein TcasGA2 TC007912 [Tribolium castaneum] |
| 01742 | 65 | 0 | 75 | 0 | 140 | 313.6 | 155.4 | gi|283100192|gb|ADB08386.1| sugar transporter 4 [Bombyx mori] |
| 01743 | 27 | 0 | 112 | 0 | 139 | 130.3 | 232.0 | gi|134252572|gb|ABO65045.1| β-hexosaminidase [Ostrinia furnacalis] |
| 01870 | 184 | 0 | 323 | 0 | 507 | 887.7 | 669.2 | gi|242010783|ref|XP_002426138.1| conserved hypothetical protein [Pediculus humanus corporis] |
| 01892 | 82 | 0 | 108 | 0 | 190 | 395.6 | 223.7 | gi|158289807|ref|XP_311448.4| AGAP010734-PA [Anopheles gambiae] |
| 01915 | 85 | 2 | 275 | 0 | 362 | 205.0 | 569.7 | gi|110757936|ref|XP_623940.2| peroxidase precursor (DmPO) [Apis mellifera] |
| 01956 | 127 | 0 | 99 | 0 | 226 | 612.7 | 205.1 | gi|156551746|ref|XP_001602035.1| ENSANGP00000015052 [Nasonia vitripennis] |
| 01972 etc. | 383 | 0 | 3327 | 0 | 3710 | 1847.7 | 6892.5 | gi|136206|sp|P22297.1|transferrin (01972 10382 11027 14937 17193 17206 17395 16606 18234 18308) |
| 02101 | 51 | 0 | 75 | 0 | 126 | 246.0 | 155.4 | gi|186909546|gb|ACC94296.1| glucose oxidase-like enzyme [Helicoverpa armigera] |
| 02104 | 59 | 1 | 67 | 1 | 128 | 284.6 | 138.8 | gi|91079628|ref|XP_967731.1| AGAP002355-PA [Tribolium castaneum] |
| 02137 | 101 | 0 | 24 | 0 | 125 | 487.2 | 49.7 | gi|91084191|ref|XP_967340.1| AGAP002557-PA [Tribolium castaneum] |
| 02144 | 82 | 0 | 132 | 3 | 217 | 395.6 | 91.2 | gi|62002223|gb|AAX58711.1| pheromone-degrading enzyme 1 [Antheraea polyphemus] |
| 02166 | 60 | 0 | 57 | 0 | 117 | 289.5 | 118.1 | gi|193876254|gb|ACF24761.1| lipid storage droplet protein 1 [Manduca sexta] |
| 02184 | 53 | 2 | 111 | 1 | 167 | 127.8 | 230.0 | gi|226342886|ref|NP_001139705.1| serpin 13 [Bombyx mori] |
| 02219 | 454 | 3 | 971 | 3 | 1431 | 730.1 | 670.5 | gi|219815604|gb|ACL36977.1| putative ecdysone oxidase [Helicoverpa zea] |
| 02329 | 143 | 0 | 411 | 0 | 554 | 689.9 | 851.5 | gi|112984054|ref|NP_001037422.1| yellow1 [Bombyx mori] |
| 02337 & | 107 | 2 | 170 | 7 | 286 | 258.1 | 50.3 | gi|91079867|ref|XP_967070.1| AGAP005945-PB [Tribolium castaneum] (02337, 15796) |
| 02361 | 7 | 4 | 70 | 1 | 82 | 8.4 | 145.0 | gi|56418425|gb|AAV91020.1| hemolymph proteinase 22 [Manduca sexta] |
| 02393 | 45 | 0 | 77 | 5 | 127 | 217.1 | 31.9 | gi|156545523|ref|XP_001607196.1| dihydroxyacetone kinase-2 homolog (yeast) [Nasonia vitripennis] |
| 02394 | 28 | 1 | 23 | 0 | 52 | 135.1 | 47.6 | gi|91077746|ref|XP_966706.1| conserved hypothetical protein [Tribolium castaneum] |
| 02409 | 113 | 0 | 187 | 0 | 300 | 545.1 | 387.4 | gi|109502352|gb|ABE01157.2| carboxylesterase [Spodoptera litura] |
| 02482 | 63 | 0 | 85 | 1 | 149 | 303.9 | 176.1 | gi|66519258|ref|XP_625210.1| ~ CG6188-PA [Apis mellifera] |
| 02609 | 97 | 0 | 146 | 2 | 245 | 468.0 | 151.2 | gi|156968285|gb|ABU98614.1| α-amylase [Helicoverpa armigera] |
| 02638 & | 241 | 0 | 206 | 0 | 447 | 1162.6 | 426.8 | gi|41016826|sp|Q27772.3|C1TC_SPOFR C-1-THF synthase, cytoplasmic (02638, 07658) |
| 02651 | 24 | 0 | 124 | 0 | 148 | 115.8 | 256.9 | gi|5326830|gb|AAD42058.1|AF122899_1 plasmatocyte-spreading peptide precursor [Manduca sexta] |
| 02800 | 28 | 0 | 97 | 0 | 125 | 135.1 | 201.0 | gi|260765449|gb|ACX49762.1| β-fructofuranosidase 1 [Manduca sexta] |
| 02847 | 33 | 0 | 103 | 0 | 136 | 159.2 | 213.4 | gi|114051702|ref|NP_001040423.1| zinc-containing alcohol dehydrogenase [Bombyx mori] |
| 02931 & | 187 | 0 | 429 | 0 | 616 | 902.1 | 888.8 | gi|1658003|gb|AAB18243.1| microsomal epoxide hydrolase [Trichoplusia ni] (02931, 04388) |
| 02947 | 518 | 21 | 981 | 56 | 1576 | 119.0 | 36.3 | gi|259493819|gb|ACW82749.1| hemocyte aggregation inhibitor protein precursor [Manduca sexta] |
| 02979 | 49 | 0 | 92 | 4 | 145 | 236.4 | 47.6 | gi|52782757|sp|Q9NJ98.1|BGRP1_MANSE β-1,3-glucan recognitionprotein 1 βGRP-1 |
| 02985 | 3 | 0 | 158 | 0 | 161 | 14.5 | 327.3 | gi|56418466|gb|AAV91027.1| serine proteinase-like protein 4 [Manduca sexta] |
| 03185 | 106 | 0 | 234 | 10 | 350 | 511.4 | 48.5 | gi|157117489|ref|XP_001658792.1| 3-hydroxyacyl-CoA dehyrogenase [Aedes aegypti] |
| 03224 | 98 | 0 | 477 | 0 | 575 | 472.8 | 988.2 | gi|226342906|ref|NP_001139715.1| serpin 22 [Bombyx mori] |
| 03226 | 222 | 0 | 663 | 0 | 885 | 1071.0 | 1373.5 | gi|153791757|ref|NP_001093275.1| myo-inositol oxygenase [Bombyx mori] |
| 03395 | 22 | 1 | 24 | 0 | 47 | 106.1 | 49.7 | gi|157908523|dbj|BAF81491.1| juvenile hormone epoxide hydrolase [Bombyx mori] |
| 03415 | 190 | 0 | 216 | 1 | 407 | 916.6 | 447.5 | gi|2708688|gb|AAB92583.1| acyl-CoA 9 desaturase [Trichoplusia ni] |
| 03434 | 1 | 0 | 387 | 0 | 388 | 4.8 | 801.7 | gi|189234566|ref|XP_001815977.1| Kaz1-ORFB CG1220-PE [Tribolium castaneum] |
| 03454 | 28 | 0 | 102 | 0 | 130 | 135.1 | 211.3 | gi|6560669|gb|AAF16712.1|AF117590_1 unknown [Manduca sexta] |
| 03483 | 280 | 0 | 374 | 0 | 654 | 1350.8 | 774.8 | gi|283558277|gb|ADB27116.1| aliphatic nitrilase [Bombyx mori] |
| 03712 | 49 | 2 | 157 | 5 | 213 | 118.2 | 65.1 | gi|170779021|gb|ACB36909.1| glutathione S-transferase θ [Antheraea pernyi] |
| 03737 | 167 | 1 | 197 | 0 | 365 | 805.6 | 408.1 | gi|56462300|gb|AAV91433.1| putative serine protease-like protein 2 [Lonomia obliqua] |
| 03776 etc. | 204 | 8 | 960 | 51 | 1223 | 123.0 | 39.0 | gi|112983872|ref|NP_001036857.1| serpin-like protein [Bombyx mori] (03776, 06215, 06531, 17814) |
| 04012 & | 167 | 3 | 727 | 11 | 908 | 268.5 | 136.9 | gi|27733411|gb|AAO21503.1|AF413062_1 leureptin, LPS binding [Manduca sexta] (04012, 08453) |
| 04413 | 69 | 1 | 133 | 1 | 204 | 332.9 | 275.5 | gi|194743582|ref|XP_001954279.1| GF18195 [Drosophila ananassae] |
| 04424 | 72 | 0 | 64 | 0 | 136 | 347.3 | 132.6 | gi|114052020|ref|NP_001040445.1| tropomyosin 1 [Bombyx mori] |
| 04430 | 74 | 0 | 68 | 0 | 142 | 357.0 | 140.9 | gi|114052573|ref|NP_001040481.1| phosphoribosyl pyrophosphate synthetase [Bombyx mori] |
| 04498 | 46 | 0 | 115 | 0 | 161 | 221.9 | 238.2 | gi|90025232|gb|ABD85119.1| JH epoxide hydrolase [Spodopteraexigua] |
| 04504 | 53 | 0 | 135 | 0 | 188 | 255.7 | 279.7 | gi|7239259|gb|AAF43151.1|AF226857_1 hemolymph JHBP precursor [Manduca sexta] |
| 04722 & | 578 | 0 | 861 | 0 | 1439 | 2788.4 | 1783.7 | gi|116791778|gb|ABK26104.1| unknown [Picea sitchensis] (04722, 04994) |
| 04781 | 56 | 0 | 237 | 0 | 293 | 270.2 | 491.0 | gi|118359591|ref|XP_001013035.1| PHD-finger family protein [Tetrahymenathermophila] |
| 04786 | 61 | 0 | 62 | 0 | 123 | 294.3 | 128.4 | gi|219686082|emb|CAW30924.1| putative aldo-ketose reductase 1 [Papilio dardanus] |
| 04791 | 144 | 0 | 200 | 0 | 344 | 694.7 | 414.3 | gi|116788175|gb|ABK24783.1| unknown [Picea sitchensis] |
| 04806 | 518 | 1 | 372 | 0 | 891 | 2499.0 | 770.7 | gi|157122933|ref|XP_001659963.1| actin [Aedes aegypti] |
| 04808 | 0 | 0 | 426 | 2 | 428 | 0.0 | 441.3 | gi|237861314|gb|AAV41237.2| immulectin-4 [Manduca sexta] |
| 04830 etc. | 59 | 2 | 755 | 6 | 822 | 142.3 | 260.7 | gi|169646838|ref|NP_001112375.1| heat shock protein 25.4 [Bombyx mori] (04830, 04887, 05717) |
| 05038 & | 101 | 0 | 175 | 1 | 277 | 487.2 | 362.5 | gi|110759694|ref|XP_394781.3| rTS β protein [Apis mellifera] (05038, 05832) |
| 05136 | 1074 | 11 | 1041 | 37 | 2163 | 471.0 | 58.3 | gi|114051966|ref|NP_001040198.1| mitochondrial aldehyde dehydrogenase [Bombyx mori] |
| 05324 | 68 | 0 | 88 | 0 | 156 | 328.0 | 182.3 | gi|225346695|gb|ACN86370.1| troponin I transcript variant C [Bombyx mandarina] |
| 05348 | 50 | 0 | 67 | 0 | 117 | 241.2 | 138.8 | gi|189234391|ref|XP_974849.2| GA16498-PA [Tribolium castaneum] |
| 05417 etc. | 273 | 0 | 917 | 0 | 1190 | 1317.0 | 1899.7 | gi|260907784|gb|ACX53694.1| alcohol DH [Heliothis virescens] (05417, 05461, 07389, 07432) |
| 05984 | 89 | 0 | 97 | 0 | 186 | 429.4 | 201.0 | gi|56462260|gb|AAV91413.1| myosin 3 light chain [Lonomia obliqua] |
| 06175 | 11 | 0 | 52 | 1 | 64 | 53.1 | 107.7 | gi|170070451|ref|XP_001869584.1| conserved hypothetical protein [Culex quinquefasciatus] |
| 06227 | 251 | 1 | 715 | 0 | 967 | 1210.9 | 1481.3 | gi|124527|sp|Q00630.1|ICYB_MANSE insecticyanin-B, blue biliprotein |
| 06251 | 66 | 2 | 57 | 7 | 132 | 159.2 | 16.9 | gi|158289206|ref|XP_310956.4| AGAP000179-PA [Anopheles gambiae] |
| 06394 | 51 | 0 | 228 | 0 | 279 | 246.0 | 472.3 | gi|110611262|gb|ABG77980.1| alanine-glyoxylate transaminase 1 [Glossinamorsitans morsitans] |
| 06588 | 60 | 0 | 75 | 0 | 135 | 289.5 | 155.4 | gi|56462256|gb|AAV91411.1| myosin 1 light chain [Lonomia obliqua] |
| 06597 | 60 | 0 | 200 | 0 | 260 | 289.5 | 414.3 | gi|56462320|gb|AAV91443.1| secreted peptide 30 [Lonomia obliqua] |
| 06732 | 115 | 1 | 244 | 0 | 360 | 554.8 | 505.5 | gi|25090512|sp|Q25513.1|HGLY_MANSE 27 kDa hemolymph glycoprotein |
| 06789 & | 159 | 0 | 460 | 0 | 619 | 767.1 | 953.0 | gi|156968291|gb|ABU98617.1| unknown [Helicoverpa armigera] (06789, 06876) |
| 06975 & | 106 | 2 | 212 | 2 | 322 | 255.7 | 219.6 | gi|189237651|ref|XP_001813448.1| N-acetyl neuraminatelyase [Tribolium castaneum] (06975, 14637) |
| 07116 & | 1 | 4 | 1015 | 4 | 1024 | 1.2 | 525.7 | gi|171262319|gb|ACB45566.1| lebocin-like protein [Antheraea pernyi] (07116, 10853) |
| 07565 | 24 | 1 | 14 | 0 | 39 | 115.8 | 29.0 | gi|7862150|gb|AAF70499.1|AF255341_1 3-dehydroecdysone 3α-reductase [Spodoptera littoralis] |
| 07608 etc. | 353 | 3 | 3931 | 0 | 4287 | 567.7 | 8143.9 | gi|159526|gb|AAA29320.1| Met-rich storage protein 1 (07608, 07975, 08141, 14688) |
| 07629 | 65 | 0 | 82 | 0 | 147 | 313.6 | 169.9 | gi|77415676|emb|CAJ01507.1| hypothetical protein [Manduca sexta] |
| 07639 & | 811 | 0 | 1616 | 18 | 2445 | 3912.5 | 186.0 | gi|134436|sp|P14754.1| alaserpin or serpin-1 (07639, 15891) |
| 07671 | 227 | 3 | 450 | 3 | 683 | 365.0 | 310.8 | gi|195164814|ref|XP_002023241.1| GL21066 [Drosophila persimilis] |
| 08076 & | 47 | 3 | 115 | 2 | 167 | 75.6 | 119.1 | gi|226342878|ref|NP_001139701.1| serpin 7 [Bombyx mori] (08076, 14528) |
| 08224 etc. | 7528 | 8 | 10093 | 0 | 17629 | 4539.6 | 20909.2 | gi|1168527|sp|P14297.2| arylphorin β subunit (08224, 16474, 16501, 16664, 16715, 16764, 18695) |
| 08467 | 0 | 0 | 113 | 0 | 113 | 0.0 | 234.1 | gi|112983866|ref|NP_001036858.1| T7 lysozyme-like protein 1 (BTL-LP1) [Bombyx mori] |
| 08500 | 138 | 0 | 407 | 0 | 545 | 665.7 | 843.2 | gi|156406857|ref|XP_001641261.1| predicted protein [Nematostella vectensis] |
| 08821 | 246 | 0 | 436 | 2 | 684 | 1186.8 | 451.6 | gi|112983550|ref|NP_001036879.1| fibrillin-like protein [Bombyx mori] |
| 08845 | 27 | 0 | 130 | 0 | 157 | 130.3 | 269.3 | gi|195029763|ref|XP_001987741.1| GH19797 [Drosophila grimshawi] |
| 08854 & | 302 | 5 | 5234 | 0 | 5541 | 291.4 | 10843.3 | gi|5869985|emb|CAB55603.1| moderately Met-rich storage protein [Spodoptera litura] (08854, 15324) |
| 09928 | 30 | 0 | 106 | 0 | 136 | 144.7 | 219.6 | gi|242090851|ref|XP_002441258.1| hypothetical SORBIDRAFT_09g023310 [Sorghum bicolor] |
| 10071 & | 15 | 1 | 1243 | 0 | 1259 | 72.4 | 2575.1 | gi|228382|prf||1803340A Met-rich storage protein SP1A (10071, 17516) |
| 10326 | 284 | 4 | 299 | 11 | 598 | 342.5 | 56.3 | gi|56462160|gb|AAV91363.1| hypothetical protein 10 [Lonomia obliqua] |
| 10791 etc. | 2 | 0 | 2756 | 2 | 2760 | 9.6 | 2854.8 | gi|4262357|gb|AAD14591.1| scolexin A [Manduca sexta] (10791, 10792, 16520, 18669, 18670, 18963) |
| 11039 etc. | 13962 | 11 | 19836 | 0 | 33809 | 6123.3 | 41094.2 | gi|114240|sp|P14296.1| arylphorin α subunit (11039 16171 16537 16814 17492 18240 18257 18556) |
| 11830 | 26 | 1 | 33 | 0 | 60 | 125.4 | 68.4 | gi|260780799|ref|XP_002585527.1| hypothetical protein BRAFLDRAFT_89257 [B. floridae] |
| 11922 & | 901 | 12 | 1052 | 3 | 1968 | 362.2 | 726.5 | gi|114058|sp|P13276.1| apoLp-III (11922, 13093) |
| 12005 | 154 | 0 | 2177 | 0 | 2331 | 742.9 | 4510.1 | gi|2625150|gb|AAB86646.1| moderately Met-rich hexamerin precursor [Hyalophora cecropia] |
| 12151 | 0 | 0 | 153 | 0 | 153 | 0.0 | 317.0 | gi|116084|sp|P14665.1|bactericidin B-5P, cecropin-like peptide precursor |
| 12749 | 135 | 0 | 1462 | 0 | 1597 | 651.3 | 3028.8 | gi|159530|gb|AAA29322.1| Met-rich storage protein 3 [Manduca sexta] |
| 13563 | 0 | 0 | 657 | 0 | 657 | 0.0 | 1361.1 | gi|110347786|gb|ABG72695.1| attacin-like protein [Antheraea mylitta] |
| 13916 etc. | 3 | 0 | 1327 | 0 | 1330 | 14.5 | 2749.1 | gi|219958086|gb|ACL68097.1| lebocin-related protein precursor [M. sexta] (13916, 17301, 17434) |
| 13994 | 57 | 0 | 62 | 0 | 119 | 275.0 | 128.4 | gi|112983654|ref|NP_001036872.1| bombyrin [Bombyx mori] |
| 14173 | 45 | 0 | 32 | 0 | 77 | 217.1 | 66.3 | gi|153792114|ref|NP_001093267.1| phosphatidylethanolamine binding protein [Bombyx mori] |
| 14375 etc. | 400 | 0 | 681 | 0 | 1081 | 1929.7 | 1410.8 | gi|400673|sp|P31420|OMBP ommochrome-binding protein precursor (14375, 14659, 17494, 17813) |
| 14380 etc. | 0 | 1 | 408 | 3 | 412 | 0.0 | 281.8 | gi|67906420|gb|AAY82587.1| attacin-1 [Manduca sexta] (14380, 14641, 16150) |
| 14700 & | 0 | 0 | 301 | 4 | 305 | 0.0 | 155.9 | gi|260765453|gb|ACX49764.1| peptidoglycan recognition protein 2 [Manduca sexta] (14700, 14752) |
| 15089 | 271 | 0 | 194 | 0 | 465 | 1307.4 | 401.9 | gi|158293921|ref|XP_315269.4| AGAP011516-PA [Anopheles gambiae] |
| 15639 | 10 | 0 | 109 | 0 | 119 | 48.2 | 225.8 | gi|148298818|ref|NP_001091784.1| multi-binding protein [Bombyx mori] |
| 16000 | 61 | 0 | 138 | 0 | 199 | 294.3 | 285.9 | gi|109458629|ref|XP_001073545.1| hypothetical protein [Rattus norvegicus] |
| 16223 | 22 | 1 | 47 | 2 | 72 | 106.1 | 48.7 | gi|242003442|ref|XP_002422733.1| bifunctional purine biosynthesis protein [Pediculus corporis] |
| 16281 & | 358 | 0 | 541 | 0 | 899 | 1727.1 | 1120.8 | gi|134103857|gb|ABO60878.1| cationic peptide CP8 precursor [Manduca sexta] (16281, 17312) |
| 16849 | 134 | 0 | 541 | 0 | 675 | 646.4 | 1120.8 | gi|114051738|ref|NP_001040426.1| alcohol dehydrogenase [Bombyx mori] |
| 17199 | 42 | 2 | 33 | 4 | 81 | 101.3 | 17.1 | gi|3108073|gb|AAC15763.1| putative multifunctional protein ADE2 [Manduca sexta] |
| 17350 | 0 | 0 | 205 | 0 | 205 | 0.0 | 424.7 | gi|29469969|gb|AAO74640.1| antimicrobial protein attacin 2 [Manduca sexta] |
| 18797 | 9 | 0 | 549 | 0 | 558 | 43.4 | 1137.4 | gi|39843367|gb|AAR32136.1| VHDL receptor [Helicoverpa zea] |
*
RA and ARN are calculated using original read numbers as described in Section 2.3. Listed here are contigs with RAIF/IH >100, RACF/CH >100, ARNIF >200 when RNIH =0, or ARNCF >200 when RNCH =0. RAIF/IH and RACF/CH values are shown in red if they are greater than 100, whereas ARNIF and ARNCF values are shown in blue if they are higher than 200. In the columns of RA or ARN, cells shaded green and orange represent down- and up-regulated gene expression, respectively. Contigs with identical BLAST results are combined, with their average RAs or ARNs calculated based on the sums of original reads in CF, CH, IF, and IH for each group. Contigs with no BLAST hit can be found in Table S4, a complete list of 250 FB CIFH contigs.