Table 3.
The 40Most Statistically Significant Pseudomonas aeruginosa Genes With Pili Propensity Scores Greater Than 4.5.
| Locus | Gene | Propensity | p value | t/n | Identification |
|---|---|---|---|---|---|
| PA0454 | 5.27 | 2.87E-07 | 12/14 | conserved hypothetical protein | |
| P3651 | cdsA | 5.20 | 6.01E-06 | 11/13 | phosphatidate cytidylyltransferase |
| PA4525 | pilA | 6.14 | 2.42E-05 | 9/9 | type 4 fimbrial precursor PilA |
| PA0618 | 6.14 | 2.42E-05 | 9/9 | probable bacteriophage protein | |
| PA0619 | 6.14 | 2.42E-05 | 9/9 | probable bacteriophage protein | |
| PA3020 | 4.83 | 2.69E-05 | 11/14 | probable soluble lytic transglycosylase | |
| PA0936 | 6.14 | 3.15E-04 | 8/8 | hypothetical protein | |
| PA4512 | 4.91 | 1.23E-02 | 8/10 | hypothetical protein | |
| PA4115 | 5.03 | 1.18E-03 | 9/11 | conserved hypothetical protein | |
| PA3235 | 5.46 | 2.64E-03 | 8/9 | conserved hypothetical protein | |
| PA0209 | 6.14 | 3.56E-03 | 7/7 | conserved hypothetical protein | |
| PA0616 | 6.14 | 3.56E-03 | 7/7 | hypothetical protein | |
| PA0617 | 6.14 | 3.56E-03 | 7/7 | probable bacteriophage protein | |
| PA0622 | 6.14 | 3.56E-03 | 7/7 | probable bacteriophage protein | |
| PA0623 | 6.14 | 3.56E-03 | 7/7 | probable bacteriophage protein | |
| PA1376 | aceK | 4.91 | 1.23E-02 | 8/10 | isocitrate dehydrogenase kinase/phosphatase |
| PA5043 | pilN | 4.91 | 1.23E-02 | 8/10 | type 4 fimbrial biogenesis protein PilN |
| PA5040 | pilQ | 4.91 | 1.23E-02 | 8/10 | type 4 fimbrial biogenesis protein PilQ |
| PA0289 | 4.91 | 1.23E-02 | 8/10 | probable transcriptional regulator | |
| PA1009 | 4.91 | 1.23E-02 | 8/10 | hypothetical protein | |
| PA1661 | 4.91 | 1.23E-02 | 8/10 | hypothetical protein | |
| PA4476 | 4.91 | 1.23E-02 | 8/10 | hypothetical protein | |
| PA4970 | 4.91 | 1.23E-02 | 8/10 | conserved hypothetical protein | |
| PA5225 | 4.91 | 1.23E-02 | 8/10 | hypothetical protein | |
| PA0461 | 5.38 | 2.62E-02 | 7/8 | conserved hypothetical protein | |
| PA0834 | 5.38 | 2.62E-02 | 7/8 | conserved hypothetical protein | |
| PA0612 | 5.38 | 2.62E-02 | 7/8 | hypothetical protein | |
| PA0628 | 5.38 | 2.62E-02 | 7/8 | conserved hypothetical protein | |
| PA4879 | 5.38 | 2.62E-02 | 7/8 | conserved hypothetical protein | |
| PA2017 | 6.14 | 3.56E-02 | 6/6 | hypothetical protein | |
| PA3209 | 6.14 | 3.56E-02 | 6/6 | conserved hypothetical protein | |
| PA5536 | 6.14 | 3.56E-02 | 6/6 | conserved hypothetical protein | |
| PA0080 | 4.78 | 1.09E-01 | 7/9 | hypothetical protein | |
| PA0502 | 4.78 | 1.09E-01 | 7/9 | probable biotin biosynthesis protein bioH | |
| PA1727 | 4.78 | 1.09E-01 | 7/9 | conserved hypothetical protein | |
| PA3726 | 4.78 | 1.09E-01 | 7/9 | conserved hypothetical protein | |
| PA4605 | 4.78 | 1.09E-01 | 7/9 | conserved hypothetical protein | |
| PA4777 | 4.78 | 1.09E-01 | 7/9 | probable two-component sensor | |
| PA5041 | pilP | 4.78 | 1.09E-01 | 7/9 | type 4 fimbrial biogenesis protein PilP |
| PA5042 | pilO | 4.78 | 1.09E-01 | 7/9 | type 4 fimbrial biogenesis protein PilO |
t is the number of organisms with pili that contain homologs to the gene, and n is the total number of genomes that contain homologs to the gene. Genes in adjacent shaded rows are paralogs.