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. 2011 Jul 25;6(7):e22509. doi: 10.1371/journal.pone.0022509

Table 1. Rationale for the selection of the miR-SNPs analyzed.

Location Gene rs NCBI(AB assay ID) Rationale *
miRNA genes MIR194-2 rs11231898(C__32062040_10) miR-194 is differentially expressed in lung cancer [11] *
MIR196A2 rs11614913(C__31185852_10) Risk of head and neck, breast, lung and gastric cancers [25], [27], [44], [45]Poor survival in lung cancer [23]
MIR149 rs2292832(C__11533078_1_) miR-149 is differentially expressed in prostate cancer [46]
MIR423 rs6505162(C__11613678_10) Risk of bladder cancer [47]Decreased risk esophageal cancer [48]
MIR146A rs2910164(C__15946974_10) Risk of papillary thyroid carcinoma [49]Risk of hepatocarcinoma [50]Risk of prostate cancer [51]
miRNA binding sites KRT81 rs3660(C__11917951_20) miRNA-binding SNPs with an aberrant SNP allele frequency in human cancers [36]
FAM179B rs1053667(C__11606996_1_) miRNA-binding SNPs with an aberrant SNP allele frequency in human cancers [36]
AFF1 rs17703261(C__32818766_10) miRNA-binding SNPs with an aberrant SNP allele frequency in human cancers [36]
miRNA-processing machinery XPO5 rs11077(C___3109165_1_) Risk of esophageal cancer [48]
RAN rs14035(C__11351340_10) Risk of esophageal cancer [48]
TRBP rs784567(C___9576934_20) Risk of bladder cancer [47]

*One of the selection criteria was a described association with a differential susceptibility to cancer development. In MIR194-2, the association was with the miRNA containing the SNP, while in all other cases, the association was with the miR-SNP itself.