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. 2011 May 31;286(30):26754–26767. doi: 10.1074/jbc.M111.239855

TABLE 1.

Crystallographic data and refinement statistics

Statistics Dataset I: NirE + SAH Dataset II: NirE + SAH + uro'gen III
Data collection
    Beamline Rigaku MircoMax 007HF BESSY (BL14.2)
    Wavelength (Å) 1.541 0.91841
    Resolution (Å)a 46.3-2.0 (2.05-2.00) 35.0-2.0 (2.05-2.00)
    Space group C2221 C2221
    Unit cell parameters
        a, b, c (Å) 60.9, 115.1, 76.8 60.9, 116.2, 77.1
        α, β, γ (°) 90, 90, 90 90, 90, 90
    Unique reflectionsa 19,360 (1,411) 18,362 (1,418)
    Multiplicitya 4.4 (4.5) 3.9 (4.0)
    Completeness (%)a 99.82 (99.86) 92.6 (99.9)
    IIa 20.19 (2.58) 22.8 (4.0)
    Rmergea,b 0.043 (0.586) 0.083 (0.451)
    Wilson B (Å2) 35.1 34.4
    Solvent content (%) 46.4 49.7

Refinement
    Rworkc 0.2349 0.2169
    Rfreed 0.2868 0.2526
    No. of atoms
        Protein 1,864 1,825
        Ligand 26 86
        Water 195 129
        Total 2,085 2,040
    Atomic displacement factors B2)e
        Overall 21.4 33.6
        Protein 21.4 33.7
        SAH 23.6 22.7
        Uro'gen III 58.8
        Water 21.4 24.0
    Molecules per asymmetric unit 1/1/0 1/1/1
                (NirE/SAH/uro'gen III)
    Real space correlation coefficientsf
        Total 0.7676 0.7806
        Protein
            Backbone 0.8204 0.8546
            Side chains 0.7848 0.8232
        SAH 0.9314 0.9427
        Uro'gen III 0.7769
    Root mean square deviation from ideal
        Bond lengths (Å) 0.0239 0.0219
        Bond angles (°) 2.167 1.935
    Ramachandran plot
        Favored (%) 97.1 97.0
        Allowed (%) 2.9 3.0
        Disallowed (%) 0.0 0.0

a Values in parentheses account for the highest resolution shell.

b Rmerge = Σ| Io−〈I〉|/ΣIo.

c Rwork = (Σ‖Fo|−|Fc‖/Σ|Fo|); |Fo|, structure factor magnitudes observed; |Fc|, structure factors calculated.

d Rfree is computed as Rwork but using 5% randomly assigned reflections excluded from refinement.

e These B factors constitute the total B factors representing isotropic (thermal) and anisotropic (domain) movement.

f Real space correlation coefficient (RSCC) = Σ|ρo−〈ρo〉|Σ|ρc − 〈ρc〉|/(Σ| ρo−〈ρo〉|2Σ|ρc−〈ρc2|)1/2; ρ, electron density values at grid points that cover the molecule in question; ρo, experimental electron density; ρc, model density.