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. Author manuscript; available in PMC: 2012 Aug 1.
Published in final edited form as: J Mol Model. 2010 Nov 26;17(8):1919–1926. doi: 10.1007/s00894-010-0892-4

Fig. 3.

Fig. 3

Root-mean-square deviations (RMSD) observed in MD simulations as a function of time; (1) all the backbone atoms and (2) all the residue within 5 Å of the ligand atoms, (A) for scFv:METH, (B) for scFv:AMP, and (C) for scFv:AMP-H2O complexes.