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Maximum likelihood tests for positive selection on CenH3 proteins in three lineagesa
| Lineage | −2 (ln λ) | P value | % sites with dN/dS >1 | Average dN/dS for those sites with dN/dS >1 |
|---|---|---|---|---|
| Tetrahymena | ||||
| Full protein | 1.55 | 0.46 | 1.5 | 1.0 |
| HFD | 0.001 | 0.99 | 0.0 | 1.0 |
| Mammals | ||||
| Full protein | 42.48 | <0.0001 | 10.3 | 3.6 |
| HFD | 23.79 | <0.0001 | 7.9 | 2.6 |
| Rosids | ||||
| Full protein | 13.80 | 0.001 | 9.8 | 2.3 |
| HFD | 23.57 | <0.0001 | 13.8 | 2.1 |
aPAML models M7 vs. M8 with an f61 substitution table
