Table 3.
Relative occurrence of GO child terms, by total and genes represented. Although SIVmac nonprogression is the phenotype of interest, these terms potentially include all phenotypic differences between Indian-derived and Chinese rhesus macaques.
GO Child Term | % Genes Represented | % Total Occurrence |
---|---|---|
cell | 92.3 | 15.5 |
binding | 69.2 | 10.6 |
intracellular | 76.9 | 9.7 |
cytoplasm | 69.2 | 7.1 |
metabolism | 61.5 | 6.2 |
catalytic activity | 46.2 | 5.8 |
hydrolase activity | 30.8 | 3.5 |
plasma membrane | 30.8 | 3.5 |
protein binding | 46.2 | 3.5 |
protein metabolism | 30.8 | 2.2 |
transport | 15.4 | 2.2 |
cell organization and biogenesis | 15.4 | 1.8 |
nucleic acid binding | 15.3 | 1.8 |
nucleobase, nucleoside, nucleotide and nucleic acid metabolism | 23.1 | 1.8 |
cell communication | 15.4 | 1.3 |
cytosol | 23.1 | 1.3 |
nucleotide binding | 15.4 | 1.3 |
nucleus | 23.1 | 1.3 |
peptidase activity | 7.7 | 1.3 |
protein modification | 15.4 | 1.3 |
RNA binding | 7.7 | 1.3 |
signal transduction | 15.4 | 1.3 |
biosynthesis | 15.4 | 0.9 |
carbohydrate metabolism | 7.7 | 0.9 |
endosome | 7.7 | 0.9 |
ion transport | 7.7 | 0.9 |
transferase activity | 7.7 | 0.9 |
organelle organization and biogenesis | 7.7 | 0.8 |
calcium ion binding | 7.7 | 0.4 |
catabolism | 7.7 | 0.4 |
cell differentiation | 7.7 | 0.4 |
cell proliferation | 7.7 | 0.4 |
cytoskeletal protein binding | 7.7 | 0.4 |
cytoskeleton | 7.7 | 0.4 |
development | 7.7 | 0.4 |
DNA binding | 7.7 | 0.4 |
Golgi apparatus | 7.7 | 0.4 |
kinase activity | 7.7 | 0.4 |
morphogenesis | 7.7 | 0.4 |
nucleoplasm | 7.7 | 0.4 |
phosphoprotein phosphatase activity | 7.7 | 0.4 |
protein kinase activity | 7.7 | 0.4 |
protein transport | 7.7 | 0.4 |
receptor activity | 7.7 | 0.4 |
reproduction | 7.7 | 0.4 |
signal transducer activity | 7.7 | 0.4 |
transcription | 7.7 | 0.4 |
transcription regulator activity | 7.7 | 0.4 |