Table 1.
Summary of QTL results for blood and meat spot trait (BMSF2) from the F2 genome scan
| Chrom. | pos cM |
Flanking markers and genomic positions | F(1) | 1%(2) | 5%(2) | 10%(2) | Add.(4) | SE(5) | Dom.(4) | SE | R2(3) |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 429 | MCW0023-MCW0145 156,472,062 - 162,032,735 |
5,86 | 8,64 | 7,52 | 4,33 | -2,27 | 1,48 | 7,07 | 2,35 | 2% |
| 2 | 0 | MCW0082 5,313,874 |
6,90 | 10,90 | 8,60 | 4,90 | -4,32 | 1,43 | 4,38 | 2,19 | 2% |
| 4 | 113 | MCW0284-ADL331 54,907,139 - 63,195,046 |
6,25 | 10,33 | 8,00 | 5,18 | -3,64 | 1,30 | -3,87 | 1,90 | 2% |
| Z | 69 | MCW258-MCW241 21,403,330 - 34,264,059 |
18,59 | 16,24 | 13,63 | 12,2 | 3,61 | 0,84 | na | na | 1% |
The effect was calculated as the effect of the allele originating from the parental RIR line. The marker map used in the Z-chromosome was: ADL117-(22cM)-MCW331-(12 cM)-MCW55-(16cM)-MCW258-(38cM)-MCW241.
1 F-ratio for the regression analysis.
2 Genome wide significant levels
3 R2 is the reduction (in %) of total phenotypic variance due to the presence of the QTL.
4 Real effect is the value divided by 100 (Add = additive effect, Dom = dominance effect)
5 SE = standard error