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. 2011 Feb 24;5(8):1303–1313. doi: 10.1038/ismej.2011.11

Table 1. One-way ANOVA and Duncan grouping method to assess β-diversity at the levels of technical replicates, biological replicates and treatments based on the combined OTUs from both forward and reverse primers.

  Data sizea With singletons
Singletons removed
    Sørensen
Bray-Curtis
Sørensen
Bray-Curtis
    β-Diversityb Significancec β-Diversityb Significancec β-Diversityb Significancec β-Diversityb Significancec
Technical replicate 42 0.756 c 0.763 c 0.734 c 0.475 b
Biological replicate 322 0.814 b 0.866 a 0.798 b 0.533 a
Warming 196 0.83 a 0.854 b 0.815 a 0.526 a
Clipping 196 0.834 a 0.853 b 0.82 a 0.525 a

Abbreviation: ANOVA, analysis of variance.

a

Data sizes (n) are the number of data points of the pairwise comparisons within the technical replicates, biological replicates or treatments.

b

We calculate two popular β-diversity dissimilarity measurements, Sørensen and Bray-Curtis, in which Sørensen dissimilarity is based on OTUs richness and Bray-Curtis dissimilarity takes OTUs abundance into account.

c

Significance at [pr(>F)]<0.05, using Duncan grouping method is shown. a, b and c represent the significance of β-diversity differences between technical replicates, biological replicates and treatments. a marks the highest β-diversity, the one less than the highest but not significant is still marked with a, then the ones significantly lower than the highest is marked with b or c.