Table S1.
Parental population allele frequencies of ancestry-informative markers
| rs# | West African | European | Amerindian |
|---|---|---|---|
| 285 | 0.971 | 0.494 | 0.442 |
| 2161 | 0.430 | 0.295 | 0.645 |
| 2695 | 0.805 | 0.845 | 0.132 |
| 2752 | 0.878 | 0.417 | 0.626 |
| 2763 | 0.129 | 0.185 | 0.631 |
| 2816 | 1.000 | 0.518 | 0.965 |
| 2862 | 0.386 | 0.201 | 0.740 |
| 3287 | 0.751 | 0.180 | 0.181 |
| 3309 | 0.401 | 0.300 | 0.707 |
| 3340 | 0.054 | 0.197 | 0.696 |
| 4646 | 0.332 | 0.287 | 0.714 |
| 6003 | 0.704 | 0.104 | 0.017 |
| 16383 | 0.261 | 0.780 | 0.052 |
| 17203 | 0.785 | 0.172 | 0.805 |
| 140864 | 0.124 | 0.007 | 0.586 |
| 174548 | 0.792 | 0.765 | 0.040 |
| 222541 | 0.036 | 0.743 | 0.982 |
| 275183 | 0.882 | 0.065 | 0.052 |
| 292932 | 1.000 | 1.000 | 0.273 |
| 344461 | 0.000 | 0.867 | 0.969 |
| 345162 | 0.102 | 0.866 | 0.810 |
| 386569 | 0.105 | 0.188 | 1.000 |
| 463717 | 0.894 | 0.360 | 0.765 |
| 594689 | 0.087 | 0.440 | 0.106 |
| 602662 | 0.418 | 0.408 | 0.050 |
| 624328 | 0.805 | 0.038 | 0.019 |
| 638169 | 0.851 | 0.040 | 0.000 |
| 717091 | 0.208 | 0.832 | 0.688 |
| 717962 | 0.868 | 0.825 | 0.125 |
| 718092 | 0.764 | 0.213 | 0.820 |
| 719776 | 0.974 | 0.150 | 0.250 |
| 723822 | 0.800 | 0.906 | 0.132 |
| 724729 | 0.107 | 0.842 | 0.974 |
| 725416 | 0.868 | 0.050 | 0.075 |
| 725667 | 0.816 | 0.075 | 0.000 |
| 726391 | 0.947 | 0.222 | 0.632 |
| 732381 | 0.908 | 0.714 | 0.357 |
| 734780 | 0.291 | 0.930 | 0.146 |
| 764679 | 0.789 | 0.975 | 0.263 |
| 768324 | 0.816 | 0.925 | 0.063 |
| 832173 | 0.889 | 0.179 | 0.207 |
| 878825 | 0.563 | 0.909 | 0.136 |
| 905595 | 0.750 | 0.192 | 0.000 |
| 938431 | 0.400 | 0.200 | 0.947 |
| 951554 | 0.711 | 0.850 | 0.200 |
| 983271 | 0.588 | 0.050 | 0.833 |
| 1003645 | 0.955 | 0.199 | 0.172 |
| 1008984 | 0.693 | 0.119 | 0.724 |
| 1042602 | 0.005 | 0.485 | 0.029 |
| 1044498 | 0.052 | 0.900 | 0.837 |
| 1058115 | 0.404 | 0.360 | 0.406 |
| 1074075 | 0.895 | 0.175 | 0.025 |
| 1112828 | 0.940 | 0.775 | 0.125 |
| 1229984 | 0.011 | 0.073 | 0.021 |
| 1316579 | 0.763 | 0.250 | 0.975 |
| 1320149 | 0.111 | 0.910 | 0.983 |
| 1320892 | 0.842 | 0.789 | 0.000 |
| 1327805 | 0.632 | 0.200 | 0.917 |
| 1352158 | 0.716 | 0.195 | 0.897 |
| 1369290 | 0.921 | 0.100 | 0.000 |
| 1373302 | 0.278 | 0.188 | 1.000 |
| 1403454 | 1.000 | 0.868 | 0.150 |
| 1415878 | 1.000 | 0.917 | 0.025 |
| 1435090 | 0.204 | 0.318 | 0.847 |
| 1461227 | 0.395 | 0.111 | 0.825 |
| 1465648 | 0.079 | 0.900 | 0.875 |
| 1487214 | 0.833 | 0.125 | 0.050 |
| 1506069 | 0.026 | 0.950 | 0.909 |
| 1526028 | 0.184 | 1.000 | 0.975 |
| 1594335 | 0.801 | 0.251 | 0.236 |
| 1780349 | 0.530 | 1.000 | 1.000 |
| 1800498 | 0.135 | 0.630 | 0.077 |
| 1808089 | 0.395 | 0.450 | 1.000 |
| 1861498 | 0.053 | 0.861 | 1.000 |
| 1881826 | 0.206 | 0.125 | 0.784 |
| 1891760 | 0.803 | 0.563 | 0.066 |
| 1935946 | 0.105 | 0.725 | 0.000 |
| 1980888 | 0.804 | 0.892 | 0.052 |
| 1986586 | 0.423 | 1.000 | 0.000 |
| 2045431 | 0.828 | 0.164 | 0.603 |
| 2077681 | 0.105 | 0.925 | 0.933 |
| 2078588 | 0.974 | 0.075 | 0.125 |
| 2118350 | 0.359 | 0.825 | 0.276 |
| 2157257 | 0.915 | 0.367 | 0.300 |
| 2188457 | 0.268 | 0.861 | 0.943 |
| 2207782 | 0.029 | 0.750 | 0.000 |
| 2216595 | 0.775 | 0.184 | 0.808 |
| 2225251 | 0.026 | 0.778 | 0.211 |
| 2228478 | 0.513 | 0.108 | 0.035 |
| 2284708 | 0.071 | 0.840 | 0.643 |
| 2292549 | 0.740 | 0.028 | 0.000 |
| 2340727 | 0.891 | 0.147 | 0.034 |
| 2341823 | 0.875 | 0.079 | 0.400 |
| 2351254 | 0.667 | 0.053 | 0.778 |
| 2396676 | 0.947 | 0.250 | 0.275 |
| 2426512 | 0.045 | 0.740 | 0.914 |
| 2542481 | 0.429 | 0.918 | 0.612 |
| 2549156 | 0.957 | 0.806 | 0.633 |
| 2671110 | 0.938 | 0.133 | 0.000 |
| 2710663 | 0.073 | 0.214 | 0.890 |
| 2776937 | 0.092 | 0.792 | 0.810 |
| 2789823 | 0.104 | 1.000 | 1.000 |
| 2806424 | 0.842 | 0.292 | 0.690 |
| 2814778 | 0.001 | 0.999 | 0.999 |
| 2877967 | 0.885 | 0.143 | 0.210 |
| 3123101 | 0.612 | 0.685 | 0.219 |
| 3751631 | 0.888 | 0.135 | 0.582 |
| 3760281 | 0.902 | 0.109 | 0.655 |
| 3782972 | 0.947 | 0.780 | 0.323 |
| 3827760 | 0.000 | 0.000 | 0.927 |
| 4676223 | 0.061 | 0.714 | 0.120 |
| 4717627 | 0.681 | 0.694 | 0.160 |
| 7163836 | 0.480 | 0.610 | 0.040 |
| 7211872 | 0.122 | 0.990 | 1.000 |
| 7246566 | 0.000 | 0.576 | 0.030 |
| 7531501 | 0.978 | 0.092 | 0.660 |
| 7786541 | 0.391 | 0.000 | 0.010 |
| 7795585 | 0.082 | 0.920 | 0.970 |
| 7854707 | 0.969 | 0.110 | 0.031 |
| 8007610 | 0.204 | 0.940 | 0.760 |
| 8072587 | 0.969 | 0.214 | 0.720 |
| 9542741 | 0.053 | 0.840 | 0.460 |
| 9809114 | 0.500 | 0.714 | 0.173 |
| 9847307 | 0.083 | 0.000 | 0.865 |
| 10483251 | 0.854 | 0.833 | 0.112 |
| 10752631 | 0.842 | 0.373 | 0.000 |
| 10756789 | 1.000 | 0.327 | 0.920 |
| 11004105 | 0.181 | 0.240 | 0.310 |
| 11160369 | 0.071 | 0.030 | 0.560 |
| 12277775 | 0.677 | 0.870 | 0.240 |
| 12439722 | 1.000 | 0.970 | 0.167 |
| 12459172 | 0.112 | 0.200 | 0.850 |
| 12598094 | 0.939 | 0.940 | 0.260 |
| 12647878 | 0.990 | 0.950 | 0.550 |
| 12692384 | 0.776 | 0.720 | 0.030 |
| 12737539 | 0.120 | 0.600 | 0.000 |
| 16834947 | 0.628 | 0.010 | 0.587 |
| 16891982 | 1.000 | 0.062 | 0.980 |
| 17822931 | 1.000 | 0.888 | 0.770 |