Table 1.
General attributes of the sequenced hemoplasma genomes.
| Hemoplasma species |
Mycoplasma haemofelis str. Langford 1 |
Mycoplasma haemofelis str. Ohio2 |
Mycoplasma suis str. KI_3806 |
Mycoplasma suis str. Illinois |
|---|---|---|---|---|
| EBML accession number | FR773153 | CP002828 | FQ790233 | CP002525 |
| Topology (chromosome) | Circular | circular | circular | circular |
| Length (nucleotides) | 1 147 259 | 1 155 937 | 709 270 | 742 431 |
| G+C content (%) | 38.9 | 38.8 | 31.1 | 31.1 |
| 1st codon | 43.5 | 43.5 | 41.0 | 41.1 |
| 2nd codon | 37.6 | 37.6 | 33.1 | 33.3 |
| 3rd codon | 36.0 | 35.9 | 20.3 | 20.1 |
| Genes per kb | 1.35 | 1.24 | 1.12 | 1.14 |
| Mean coding density % (mean gene density % i.e. including ribosomal genes) | 94.9 (95.8) | 94.3 (95.0) | 87.3 (90.1) | 89.1 (90.1) |
| Putative ORFs | 1 545 | 1 548 (inc. 25 pseudo) | 794 (inc. 15 pseudo) | 844 (inc. 5 pseudo) |
| Uncharacterized ORFs (of which were identified as paralogs) | 1 228 (1 115) | 1 251 (1,013) | 523 (229) | 550 (240) |
| Structural RNAs | 35 | 35 | 36 | 36 |
| Ribosomal RNA (16S; 5S and 23S) | 3 | 3 | 3 | 3 |
| Transfer RNA | 31 | 31 | 32 | 32 |
| Ribonuclease P β-subunit gene | 1 | 1 | 1 | 1 |
ORF = open reading frame