Table 2.
Primera | Sequence (5′–3′)b | Purpose | Reference or source |
---|---|---|---|
hk1-F | CGTCAATTTATTTTCTAAGGATATTTTC | qRT-PCR | This work |
hk1-R | TGCTTCGTCTTCAATTTCACT | qRT-PCR | This work |
rrp1-F | AAGGTGCTTACGAGATTGAG | qRT-PCR | This work |
rrp1-R | TCTGTGGAACTTCTTGAACTAA | qRT-PCR | This work |
ups.hk1-5′ | GGGTCCTGGAAGAATACCAGGTTG | Cloning and mutagenesis | This work |
dwns.hk1-3′ | GTGGGGAGAATCATCCACAATTAA | Cloning and mutagenesis | This work |
hk1-KO-5′ | CCCATTCAACATTTTTATCCAATTTT | Confirm insertion within hk1 | This work |
hk1-KO-3′ | TGGACCAGCATCATCATTGCTTAGGTCTTTTG | Confirm insertion within hk1 | This work |
hk1-KO junc-5′ | AGGTTAAAAAACGTTAACACCAT | Confirm complementation | This work |
flgB-5′ | GCGCCATGGTACCCGAGCTTCAAGGAAGA | Construction pSP1G | This work |
gent-3′ | GCGCCATGGTTAGGTGGCGGTACTTGGG | Construction pSP1G | This work |
Hk1 compl-5′ | GCGGGATCCGGGTCCTGGAAGAATACCAG | Complementation | This work |
Hk1 compl-3′ | GCGCTGCAGTTCCACTGCTAATATCTCTTATT | Complementation | This work |
flaB-F | CTTTTCTCTGGTGAGGGAGCTC | qRT-PCR, qPCR | 53 |
flaB-R | GCTCCTTCCTGTTGAACACCC | qRT-PCR, qPCR | 53 |
flaB-Probe | CTTGAACCGGTGCAGCCTGAGCA | qRT-PCR, qPCR | 53 |
nidogen-F | CCCCAGCCACAGAATACCAT | qPCR | 81 |
nidogen-R | AAAGGCGCTACTGAGCCGA | qPCR | 81 |
nidogen-probe | CCGGAACCTTCCCACCCAGC | qPCR | 81 |
F, forward; R, reverse.
Restriction sites are in boldface.