Table 1.
Primer and probe sequences
| Primer or probe | Sequence (5′-3′)a | Source or reference |
|---|---|---|
| CTX-M Gp1.F | GGAATCTGACGCTGGGTAAA | This work |
| CTX-M Gp1.R | GGTTGAGGCTGGGTGAAGTA | This work |
| CTX-M Gp1.Pr | 6-FAM-ACTATGGCACCACCAACGAT-BHQ-1 | This work |
| CTX-M Gp9.F | GGTGATGAACGCTTTCCAAT | This work |
| CTX-M Gp9.R | TCAATTTGTTCATGGCGGTA | This work |
| CTX-M Gp9.Pr | HEX-CAGAGTGAAACGCAAAAGCA-BHQ-1 | This work |
| SHV-5/12.F | AGCTGCTGCAGTGGATGGT | This work |
| SHV-5/12.R | CAATGCGCTCTGCTTTGTTA | This work |
| SHV-5/12.Pr | Tx Red-ACCGGAGCTAGCAAGCGG-BHQ-2 | This work |
| VEB.F | CAAATGCACAAGGATTGGAA | This work |
| VEB.R | ATTCCGGAAGTCCCTGTTTT | This work |
| VEB.Pr | Cy5-AAATTGGGCAACCCCAAC-BHQ-2 | This work |
| imp-BE1 | CAYGGTTTGGTGGTTCTTGTAA | 4 |
| imp-BE2 | CCTTTAACVGCCTGYTCTYMT | 4 |
| Vim-F | GATGGTGTTTGGTCGCATA | 3 |
| Vim-R | CGAATGCGCAGCACCAG | 3 |
| NDM.F | CTTCCAACGGTTTGATCGTC | This work |
| NDM.R | ATTGGCATAAGTCGCAATCC | This work |
| CITMF | TGGCCAGAACTGACAGGCAAA | 12 |
| CITMR | TTTCTCCTGAACGTGGCTGGC | 12 |
| DHAMF | AACTTTCACAGGTGTGCTGGGT | 12 |
| DHAMR | CCGTACGCATACTGGCTTTGC | 12 |
a
6-FAM, 6-carboxyfluorescein; HEX, hexachlorofluorescein; Tx Red, Texas Red; BHQ, Black Hole Quencher.