Table 2.

Probe sequences for fluoroquinolone and aminoglycosides

Gene and probe no.	Probe	Description	Sequencea
gyrA
1	Codon 90	Wild type	5′-ACC ACC CGC ACG GCG ACG CGT C-3′
2	Codon 90	Mutant type	5′-ACCACC CGC ACG GCG ACG TGT C-3′
3	Codon 91	Mutant type	5′-ACC CGC ACG GCG ACG CGC C-3′
4	Codon 94	Wild type	5′-CG ATC TAC GAC AGC CTG GTG-3′
5	Codon 94	Mutant type I	5′-CG ATC TAC GCC AGC CTG GTG-3′
6	Codon 94	Mutant type II	5′-CG ATC TAC GGC AGC CTG GTG-3′
7	Codon 94	Mutant type III	5′-CGA TCT ACT ACA CCC TGG TG-3′
8	Codon 94	Mutant type IV	5′-CGA TCT ACA ACA CCC TGG TG-3′
9	Codon 95	Polymorphism	5′-CGA TCT ACG ACA CCC TGG TG-3′
gyrB
10	510	Wild type	5′-GTG CTA AAG AAC ACC GAA G-3′
11	510	Mutant type	5′-CGA CCG GGT GCT AAA GAG CA-3′
rrs
12	1401	Wild type	5′-ACC GCC CGT CAC GTC ATG AA-3′
13	1401	Mutant type	5′-ACC GCC CGT CGC GTC ATG AA-3′
14	1402	Mutant type	5′-ACC GCC CGT CAA GTC ATG AA-3′
15	1484	Wild type	5′-CGG CGA TTG GGA CGA AGT C-3′
16	1484	Mutant type	5′-CGG CGA TTG GGA CTA AGT C-3′

^aThe boldface with an underscore indicates the change in the nucleotide sequence.