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. 2011 Aug 2;5(8):e1256. doi: 10.1371/journal.pntd.0001256

Figure 5. The abundance of sense and antisense siRNAs that mapped to the S. japonicum TEs.

Figure 5

The TPM of the siRNA sequences generated from TEs during different developmental stages was presented with bars in different colors. A. Endo-siRNAs mapped to the LTR retrotransposon SjCHGCS11. The amount of siRNAs generated from the sense and antisense strands were similar but with different stage preferences. B. Endo-siRNAs mapped to TE of LINE type, Sjpido (upper), SjR1 (middle), SjR2 (lower). Compared to those from LTR, siRNAs from these TEs were transcribed from more concentrated region in the genes. C. Endo-siRNAs mapped to TE of SINE Type, Sj-alpha-1 (upper), Sj-alpha-2 (lower). D. Endo-siRNAs mapped to TE of TIR type (Sj_Blaster_Recon_7337_MAP_14) and MITE type (Sj_Blaster_Grouper_1934_MAP_4). The sum and percentage of TPM of sense and antisense siRNAs from each stage were displayed in Pie Chart.