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. 2011 Aug 2;6(8):e22477. doi: 10.1371/journal.pone.0022477

Table 5. Results of incorporating small molecules in Rosetta v3.2.

		without ligand				with ligand
PDB	ligand	N₅	µ (N₅) [σ(N₅)]	P_success	I_rmsd (Å)	N₅	µ (N₅) [σ(N₅)]	P_success	I_rmsd (Å)
1EWY	FAD	1	1.0 [1.1]	0.02	3.01	3	2.6 [1.2]	0.22	1.07
1GRN	GDP, Mg	1	1.1 [1.0]	0.02	1.24	2	2.3 [1.2]	0.18	1.02
1WQ1	GDP, Mg	3	2.8 [1.3]	0.30	1.48	2	1.9 [1.2]	0.12	2.90
1RLB	Retinoic acid	1	0.8 [0.9]	0.01	3.88	2	2.1 [1.3]	0.16	1.99
1R8S	GDP	0	0.0 [0.0]	0.00	5.21	0	0.0 [0.0]	0.0	4.19