Table I.
Protein | eqFP578f pH 5.5 (PDB_ID: 3PIB) | eqFP578f pH 4.0 (PDB_ID: 3PJB) | Katushka pH 8.5 (PDB_ID: 3PJ7) | Katushka pH 5.0 (PDB_ID: 3PJ5) |
---|---|---|---|---|
Crystallographic data | ||||
Space group | I41 | P6122 | I41 | P6122 |
Cell dimensions (Å, °) | a, b = 161.2, c = 75.7 | a, b = 104.7, c = 216.5 | a, b = 161.4, c = 74.5 | a, b = 104.4, c = 218.0 |
Z/(Z') | 32 (4) | 24 (2) | 32 (4) | 24 (2) |
Estimated solvent content (%) | 45 | 60 | 44 | 60 |
Temperature (K) | 100 | 100 | 100 | 100 |
Wavelength (Å) | 1.00 | 1.00 | 1.00 | 1.00 |
Resolution range (Å) | 35.9–1.15 (1.19–1.15)a | 34.7–1.75 (1.82–1.75)a | 25.0–1.85 (1.93–1.85)a | 30.0–1.60 (1.66–1.60)a |
Total reflections measured | 1,761,066 | 793,793 | 390,600 | 645,605 |
Unique reflections observed | 314,476 | 69,631 | 78,120 | 88,439 |
Multiplicity | 5.6 (4.7)a | 11.4 (11.6)a | 5.0 (5.0)a | 7.3 (7.2)a |
I/σ (I) | 28.3 (2.4)a | 28.6 (4.4)a | 16.7 (2.6)a | 19.6 (2.4)a |
Rmerge | 0.055 (0.488)a | 0.062 (0.562)a | 0.096 (0.655)a | 0.106 (0.719)a |
Completeness (%) | 92.8 (59.9)a | 97.8 (94.8)a | 97.7 (97.1)a | 97.5 (97.0)a |
Refinement statistics | ||||
Non-H atoms in model | ||||
Protein | 7,288 [4×(1-230) res] | 3,559 [2×(2-226) res] | 7,151 [4×(3-227) res] | 3,646 [2×(0-225) res] |
Water | 721 | 340 | 463 | 288 |
SO4 | 15 (3 ions) | |||
Glycerol | 24 (4 mol) | 12 (2 mol) | 0 | 0 |
Rworkb | 0.155 (99.0% data, F ≥ 0) | 0.177 (98.0% data, F ≥ 0) | 0.196 (97.9% data, F ≥ 0) | 0.187 (98.0% data, F ≥ 0) |
Rfreeb | 0.177 (1.0% data, F ≥ 0) | 0.208 (2.0% data, F ≥ 0) | 0.252 (2.1% data, F ≥ 0) | 0.226 (2.0% data, F ≥ 0) |
Mean B factor/(RMSD)c (Å2) | ||||
Protein atoms | ||||
main chain | 13.6 (0.9)c | 25.2 (2.0)c | 33.8 (0.9)c | 23.9 (0.7)c |
side chain | 16.3 (2.0)c | 29.1 (3.5)c | 35.2 (2.1)c | 25.6 (1.6)c |
Chromophore | 13.5 (3.3)c | 24.3 (4.3)c | 31.7 (1.4)c | 21.0 (2.4)c |
Ramachandran statistics (%) | ||||
Preferred/allowed/disallowed regions | 98.2/1.8/0.0 | 98/2.0/0.0 | 97.0/2.5 /0.5 | 97.0/2.5/0.5 |
Values in parentheses are given for the highest-resolution shells.
Percent of the data reserved for working and free sets.
Root mean square deviation.