Table 2.
Candidate genes located within GWS QTL regions and discussed in the paper
| QTL | Positions (Sscrofa9) | Reference | Full name | Gene |
|---|---|---|---|---|
| 2a | 41501759 - 41519677 | De Fabiani et al., 2010 | Cytochrome P450, subfamily IIR, polypeptide 1 | CYP2R1 |
| 2b | 10440795-104856025 | Rodriquez-Agudo et al., 2008 | START domain containing 4, sterol regulated | STARD4 |
| 3a | 39059355 - 39072049 | Gumus et al., 2008 | Interleukin Alpha 1 | IL1A |
| 3a | 42095144 - 42118620 | Horibata & Sugimoto, 2010 | START domain containing 7, sterol regulated | STARD7 |
| 3a | 44005314 - 44096991 | Bray et al., 2009 | UDP-glucuronate decarboxylase 1 | UXS1 |
| 4 | 47901914-47937394 | Amills et al., 2005 | 2,4-alpha-dienoyl-CoA reductase 1 | DECR1 |
| 4 | 47870808-47893791 | Opperman et al., 1992 | Calbindin 1, 28kDa | CALB1 |
| 5 | hsa12: 56114151-56118525* | Wang et al. 1999 | Retinol dehydrogenase | Rdh5 |
| 5 | hsa12: 57157108- 57181574* | Moeller & Adamski, 2006 | Hydroxysteroid (17-beta) dehydrogenase 6 homolog | HSD17B6 |
| 7a | 27908299 - 27911241 | Crawford et al., 1992 | cytochrome P450, fam. 21,subfam. A, polypeptide 2 iso a | CYP21/CYP21A2 |
| 7b | 64454785 - 64461043 | Diaz & Squires, 2000 | cytochrome P450, family 1, subfamily A, polypeptide 1 | CYP1A1 |
| 7b | hsa15:74630100 - 74660081* | Miller, 1995 | cytochrome P450, family 11, subfamily A, polypeptide 1 | CYP11A1 |
| 7c | 127029340-127072433 | Wiebe et al., 2010 | vaccinia related kinase 1 | VRK1 |
| 7as | 64280270 - 64285232 | Lanza and Yost, 2001 | cytochrome P450, family 1, subfamily A, polypeptide 2 | CYP1A2 |
| 13 | 19112438 - 19141042 | Bahn et al., 2005 | solute carrier family 22, member 14 | SLC22A14 |
| 13 | 19146069 - 19153361 | Bahn et al., 2005 | solute carrier family 22, member 13 | SLC22A13 |
| 14 | 148132846-148145308 | Babol et al., 1998 | cytochrome P450, family 2, subfamily E, polypeptide 1 | CYP2E1 |
| 15 | 64064865-64074555 | Christoffersen et al., 2010 | Glucagon | GCG |
| 15 | hsa8: 38000226-38008783* | Christenson & Strauss, 2000 | Steroidogenic acute regulatory protein | STAR |
* Gives the comparative human genomic positions on Build37 for the genes not annotated in Sscrofa9.