Table 2.
Base substitutions (bs) in CB4856 and CB4858 relative to the N2 reference genome*.
| N2-> CB4856 | Base Sub | N2->CB4856 | Base Sub | N2>CB4 858 | Base Sub | N2->CB4858 | Base Sub | |
|---|---|---|---|---|---|---|---|---|
| Transitions | ||||||||
| G->A | 621 (0.11) |
A->G | 745 (0.14) |
G->A | 5266 (0.14) |
A->G | 5375 (0.14) |
|
| C->T | 639 (0.12) |
T->C | 722 (0.13) |
C->T | 5163 (0.14) |
T->C | 5341 (0.14) |
|
| Transversions | ||||||||
| C->A | 278 (0.05) |
A->C | 374 (0.07) |
C->A | 1871 (0.05) |
A->C | 1945 (0.05) |
|
| G->T | 276 (0.05) |
T->G | 345 (0.06) |
G->T | 1906 (0.05) |
T->G | 1893 (0.05) |
|
| T->A | 480 (0.09) |
A->T | 484 (0.09) |
T->A | 3185 (0.09) |
A->T | 3240 (0.09) |
|
| G->C | 240 (0.04) |
C->G | 232 (0.04) |
G->C | 964 (0.03) |
C->G | 989 (0.03) |
*Number (Proportions out of all base substitutions in each strain: 5436 base substitutions in CB4856 and 37138 base substitutions in CB4858)