Table 3.

Single nucleotide variations identified in the HCC1954 and HCC1954BL genomes

	HCC1954	HCC1954BL
	N (%) in dbSNP	N (%) in dbSNP
Substitutions	82 355 (92.68)	83 474 (93.60)
Coding	11 717 (90.92)	12 373 (93.84)
Intronic	60 314 (92.53)	61 428 (93.77)
UTR	3419 (92.57)	3570 (94.04)
ncRNA	256 (96.87)	260 (96.92)
Intergenic	6649 (91.84)	5843 (90.86)
Indels	689 (52.10)	587 (52.81)
Coding	38 (50.00)	31 (51.61)
Intronic	595 (52.43)	506 (54.15)
UTR	30 (46.66)	26 (42.30)
ncRNA	1 (100.00)	1 (0.00)
Intergenic	25 (52.00)	23 (39.13)

UTR = untranslated region, ncRNA = non-coding RNA