Table 5. Results concerning the ten most probable models in the breast cancer study in [1].
SNP | prior = 0.00001 | prior = 0.0001 | prior = 0.01 | prior = 0.1 | p-value | Šidák | previous BC association |
rs10510126 | 0.0118 | 0.1185 | 0.9967 | 0.9992 |
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0.7307 | No |
rs17157903 | 0.0031 | 0.0306 | 0.9693 | 0.9968 |
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0.9919 | Yes |
rs2420946 (FGFR2) | 0.0022 | 0.0218 | 0.9570 | 0.9955 |
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0.9997 | Yes |
rs1219648 (FGFR2) | 0.0021 | 0.0209 | 0.9552 | 0.9953 |
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0.9986 | Yes |
rs7696175 | 0.0013 | 0.0131 | 0.9298 | 0.9925 |
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0.9997 | Yes |
rs197275 | 0.0012 | 0.0123 | 0.9256 | 0.9920 | Not Avl. | Not Avl. | No |
rs12505080 | 0.0012 | 0.0123 | 0.9255 | 0.9920 |
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0.9881 | No |
rs210739 | 0.0011 | 0.0114 | 0.9204 | 0.9914 | Not Avl. | Not Avl. | Yes |
rs10779967 | 0.0011 | 0.0113 | 0.9194 | 0.9913 | Not Avl. | Not Avl. | No |
rs2981579 (FGFR2) | 0.0008 | 0.0083 | 0.8933 | 0.9882 | Not Avl. | Not Avl. | Yes |
Columns 2–5 show posterior probabilities for various priors, while Columns 6 and 7 shows p-values (obtained from [1]) and Sidák-corrected p-values.