Table 1.
List of primer sequences for quantitative PCR, the annealing temperature for each primer, and where the primers were obtained
Target Gene | Sequence | AT | Source |
---|---|---|---|
β-Actin | FP: 5′-ATCGCTGACAGGATGCAGAAG-3′ | 58 | Zhu and Altmann (77) |
RP: 5′-TCAGGAGGAGCAATGATCTTGA-3′ | |||
Collagen I | FP: 5′-CCCAAGGAAAAGAAGCACGTC-3′ | 55 | Li et al. (26) |
RP: 5′-AGGTCAGCTGGATAGCGACATC-3′ | |||
Collagen I | FP: 5′-TACAACGCAGAAGGGGTGTC-3′ | 55 | Tashiro et al. (66) |
RP: 5′-CCTCAGCAACAAGTTCGACG-3′ | |||
Collagen III | FP: 5′-ATGGTGGCTTTCAGTTCAGC-3 | 55 | Tashiro et al. (66) |
RP: 5′-TGTCTTGCTCCATTCACCAG-3′ | |||
Collagen V | FP: 5′-AGGGACCAACTGGGAAGAGT-3′ | 55 | Li et al. (26) |
RP: 5′-AAAGTCAGAGGCAGCCAGAT-3′ | |||
Collagen VI | FP: 5′-AACGTGTGGCTAACCTGGAG-3′ | 53 | Designed |
RP: 5′-TATTATCAAGCTGCTCCGCC-3′ | |||
Collagen VI | FP: 5′-TGCTCACCTGAGGCGCTTGC-3′ | 61 | Designed |
RP: 5′-CCGCCTGCCTCCGTGAAGTG-3′ | |||
Collagen XI | FP: 5′-TCCGCCTGGAGCTTCCGGTT-3′ | 61 | Designed |
RP: 5′-GACCCTGAGGTCCGACCGGG-3′ | |||
Collagen XXVII | FP: 5′-GTCAGATTGGAGCAGGGGTA-3′ | 55 | Designed |
RP: 5′-ATGCTCTGGATGAGGTTGCT-3′ | |||
Cthrc1 | FP: 5′-TTCAGGACCTCTTCCCATTG-3′ | 54 | Designed |
RP: 5′-CACAGAGTCCTTCCACGGAG-3′ | |||
Mmp3 | FP: 5′-CTCTCTCAAGATGATGTAGATGGTATTC-3′ | 53 | Maeda et al. (33) |
RP: 5′-AGCTACACATTGGTAAGGTCTCAG-3′ | |||
Mmp11 | FP: 5′-GGAGACTATTGGCGTTTCCA-3′ | 53 | Designed |
RP: 5′-AGTAGGCATAGCCCTCAGCA-3′ | |||
Mmp12 | FP: 5′-CTGGGCAACTGGACACCT-3′ | 60 | Wasserman et al. (74) |
RP: 5′-CTACATCCGCACGCTTCA-3′ | |||
Mmp13 | FP: 5′-GCATGAAAACTGTGGGGAGT-3′ | 58 | Fang et al. (11) |
RP: 5′-AGCTGAAATCTTGCCTTGGA-3′ | |||
Mmp14 | FP: 5′-GAGGGTCATGAGAAGCAGGC-3′ | 56 | Strup-Perrot et al. (64) |
RP: 5′-TCAAAGGGTGTGCTGTCGC-3′ | |||
Mmp19 | FP: 5′-AGGATACTGGCAATGGGATG-3′ | 53 | Designed |
RP: 5′-TAGCTGCTGAGGGTTGGTCT-3′ | |||
Timp1 | FP: 5′-GTTCCCTGGCATAATCTGAG-3′ | 52 | Johnson et al. (18) |
RP: 5′-GGGATGAGGATCTGATCTGT-3′ | |||
Postn | FP: 5′-AGGAGCCGTGTTTGAGACCAT-3′ | 54 | Hiroi et al. |
RP: 5′-CGGTGAAAGTGGTTTGCTGTTT-3′ | |||
Prss35 | FP: 5′-TAGGAGAAGGAGGCAGGTGTATGG-3′ | 53 | Miyakoshi et al. (37) |
RP: 5′-TAAGCACAGTTGGCAGCGTTTCCG-3′ |
AT, annealing temperature; FP, forward primer; RP, reverse primer.