Skip to main content
. 2011 Aug 11;6(8):e23450. doi: 10.1371/journal.pone.0023450

Table 6. Properties and potential functional effects of UTR mutations.

Annotationa Novel? OR (95% CI)b NT conservationc Predicted motif Predicted target location Score P Interpretation
ATF5
r.860G>A Y 0.23 (0.05–1.08) 0 hsa-miR-193b targetd chr:1955128171–55128193 15.71 0.002 Potential miR target disrupted
r.871G>A 1.10 (0.91–1.32) hsa-miR-193b targetd chr:1955128171–55128193 15.71 0.002 Potential miR target disrupted
Disc1
r.-7G>A 1.03 (0.26–4.13) 0 No obvious functional effect
r.2105A>G 0.95 (0.79–1.14) + hsa-miR-633 target chr:1230069003–230069025 16.40 0.035 Potential miR target disrupted
hsa-miR-30d* targetd chr:1230069012–230069032 16.60 0.047
NDE1
r.1041A>C 0.99 (0.82–1.17) No obvious functional effect
PAFAH1B1
r.1250C>T + No obvious functional effect (though genomically conserved)
YWHAE
r.-41G>A Y 0.97 (0.44–2.14) + No obvious functional effect (though genomically conserved)
r.-54C>G Y 1.28 (0.76–2.14) + No obvious functional effect (though genomically conserved)
ZNF365
r.1248T>C 1.05 (0.43–2.52) No obvious functional effect
a

Rare mutations (MAF<1%) are underlined.

b

OR>1.5 or <0.67 are shown in bold.

c

NT conservation assessed by the GERP score: -, divergent (score <−1); +, conserved (score >1); 0, intermediate (−1< score <1).