Table 1.

Genetic map assessments at different size scales

Scale (interval size)	ρ - Pearson correlation of the AA map (deCODE Map) to the specified LD map			Est. correlation of AA Map to the true map (inferred by MCMC)*	Est. coefficient of variation of AA Map (std. err. divided by crossover rate expected for interval size)*
	Combined LD§	CEU	YRI
3 kb	0.75 (0.63)	0.66 (0.58)	0.71 (0.53)	0.93	1.41
10 kb	0.82 (0.74)	0.73 (0.70)	0.78 (0.65)	0.96	0.73
30 kb	0.86 (0.83)	0.78 (0.78)	0.83 (0.74)	0.98	0.36
100 kb	0.91 (0.89)	0.84 (0.85)	0.87 (0.81)	0.99	0.17
300 kb	0.94 (0.93)	0.89 (0.90)	0.92 (0.88)	1.00	0.08
1 Mb	0.97 (0.96)	0.94 (0.94)	0.95 (0.95)	1.00	0.04
3 Mb	0.98 (0.98)	0.97 (0.97)	0.98 (0.97)	1.00	0.02

Note: The numbers in this table are restricted to the autosomes and genomic segments more than 5 Mb from the telomere.

^§The Combined map is the HapMap2 population-averaged LD-based map18¹⁸.

^*The standard error of the map at each size scale is determined by the posterior probability distribution of the MCMC.