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. Author manuscript; available in PMC: 2012 Oct 26.
Published in final edited form as: J Chem Inf Model. 2011 Apr 26;51(5):1074–1082. doi: 10.1021/ci200083f

Table 2.

Key geometric parameters at the active site of the lisinopril-ACE complex

Bond length (Å) and
bond angle (deg)
QM/MM MD X-ray6
Zn···Nε2 (H383) 2.02±0.06 2.04
Zn···Nε2 (H387) 1.98±0.06 2.07
Zn···Oε1(E411) 2.06±0.07 1.99
Zn···O1 2.09±0.14 2.14
O2···Hε2(E384) 1.78±0.15 2.69
O9···Hζ1(K511) 1.59±0.09 2.93a
O9···Hη(Y520) 1.70±0.13 2.55b
O7···Hε2(H353) 1.97±0.25 2.76a
O1···Hη(Y523) 1.86±0.24 2.77b
H6···O(A354) 2.36±0.59 2.92
Oε2(E162)···Hζ(Lys) 1.81±0.30e 3.45
Cl···Zn 10.14±0.29 10.37
Cl···Hε(R522) 1.95±0.14 3.08c
Cl···H22(R522) 1.93±0.15 3.55c
Cl···Hη(Y224) 1.85±0.35 3.01d
Nε2(H383)···Zn···O1 110.4±8.1 116.8
Nε2(H387)···Zn···O1 125.2±7.8 123.0
Oε1(E411)···Zn···O1 104.2±8.3 98.8
a

distance between O and O atoms.

b

distance between O and N atoms.

c

distance between Cl and N atoms.

d

distance between Cl and O atoms.

e

averaged distance between Oε2 and the Hζ involved in hydrogen bonding.