Table 3.
Bond length (Å) and bond angle (deg) |
QM/MM MD | X-ray11 |
---|---|---|
Zn···Nε2(H383) | 1.99±0.06 | 2.10 |
Zn···Nε2(H387) | 1.98±0.06 | 2.05 |
Zn···Oε1(E411) | 2.04±0.07 | 1.89 |
Zn···O1 | 2.08±0.08 | 2.01 |
O2···Hε2(E384) | 1.82±0.16 | 2.71a |
O9···Hζ1(K511) | 1.65±0.14 | 2.84b |
O9···Hη(Y520) | 1.71±0.20 | 2.61a |
O7···Hε2(H353) | 1.95±0.25 | 2.68b |
O1···Hη(Y523) | 1.72±0.14 | 2.82a |
H6···O(A354) | 1.94±0.24 | 2.96b |
Cl···Zn | 10.11±0.31 | 10.40 |
Cl···Hε(R522) | 1.89±0.12 | 3.15c |
Cl···H22(R522) | 1.96±0.16 | 3.53c |
Cl···Hη(Y224) | 1.85±0.31 | 3.09d |
Nε2(H383)···Zn···O1 | 110.7±7.6 | 116.5 |
Nε2(H387)···Zn···O1 | 118.9±7.8 | 125.2 |
Oε1(E411)···Zn···O1 | 103.5±7.3 | 103.6 |
distance between O-O atoms.
distance between O-N atoms.
distance between Cl and N atoms.
distance between Cl and O atoms.