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. 2011 Aug 17;6(8):e23793. doi: 10.1371/journal.pone.0023793

Table 6. Effect of normalization strategy on statistical parameters calculated for Nppb and Vcam1 expression using single reference genes.

Tpt1 Hprt Rpl13a Ppia Tbp Eef1a1 B2m Actb Polr2a Gapdh
Nppb p-value <0.001 0.023 0.005 0.023 0.123 0.280 0.631 0.436 0.912 0.005
power 0.998 0.715 0.933 0.647 0.153 0.231 0.078 0.255 0.107 0.488
n 5 13 7 14 82 48 296 42 137 20
Vcam1 p-value <0.001 <0.001 0.001 0.029 0.004 0.631 0.579 0.105 0.796 0.001
power 0.998 1 0.992 0.619 0.937 0.136 0.059 0.345 0.050 0.997
n 5 4 6 15 7 96 943 21 >1000 5

Two-tailed Mann-Whitney U test was used for calculating p-values. The statistical power was calculated for a Student's t-test using statistical parameters of log2 transformed expression data. Sample size (n) is number per group needed to obtain a power of at least 0.8. Nppb: group 2 vs. group 3; Vcam1: group 1 vs. group 3.