Table 1.
Primer (restriction sites in bold; mismatched bases in italic; tags underlined) | Target plasmid | Restriction sites | Resulting plasmid | Resulting strain/XK activity |
---|---|---|---|---|
Fw: 5′-CGCGGATCCTTGTGTT | ||||
CAGTAATTCAGAGACAGACAAG-3′ | ||||
Rev: 5′-CGGGAATTCTTAGATGA | ||||
GAGTCTTTTCCAGTTCGCTTAAG-3′ | ||||
Annealing temperature: 59 °C (30 cycles) | pTrcHisA | BamH1/EcoR1 | pTrcHisA[XKS1]a | E. coli Top 10 [pTrcHisAXKS1]/– U/mg |
Fw: 5′CCGGAATTCTTGTGTTC | ||||
AGTAATTCAGAGACAGACAAG3′ | ||||
Rev: 5′TTCTGCAGTTAGATGAG | ||||
AGTCTTTTCCAGTTCGCT3′ | ||||
Annealing temperature: 59 °C (30 cycles) | pTrc99A | EcoR1/Pst1 | pTrc99A[XKS1]b | E. coli XL1-Blue [pTrc99AXKS1]/4.5 U/mg |
Fw: 5′CCGGAATTCTTGTGTTCA | ||||
GTAATTCAGAGACAGACAAG3′ | ||||
Rev: 5′-TTCTGCAGTTAATGATGAT | ||||
GATGATGATGGATGAGAGTCTTTTC | ||||
CAG TTCGCT-3′ | ||||
Annealing temperature: 62 °C (30 cycles) | pTrc99A | EcoR1/Pst1 | pTrc99A[XKS1His]c | E. coli XL1-Blue pTrc99A[XKS1His]/3 U/mg |
Fw: 5′-CCGGAATTCTTGTGTTCAG | ||||
TAATTCAGAGACAGACAAG3′ | ||||
Rev: 5′-TTCTGCAGTTATTTTTCGA | ||||
ACTGCGGGTGGCTCCAAGCGCTG | ||||
ATGAGAGTCTTTTCCAGTTCGCT3′ | ||||
Annealing temperature: 65 °C (30 cycles) | pTrc99A | EcoR1/Pst1 | pTrc99A[XKS1Strep]d | E. coli XL1-Blue pTrc99A[XKS1Strep]/2.3 U/mg |
Fw: 5′-CGCGGATCCTTGTGTTCAG | ||||
TAATTCAGAGACAGACAAG-3′ | ||||
Rev: 5′-CGGGAATTCTTAGATGAGA | ||||
GTCTTTTCCAGTTCGCTTAAG-3′ | ||||
Annealing temperature: 59 °C (30 cycles) | pGEX-6P-2 | BamH1/EcoR1 | pGEX[XKS1]e | E. coli BL21 (DE3) pGEX[XKS1]/1.7 U/mg |
Fw: 5′-ATACATATGTGTTCAGTAATTC | ||||
AGAGA-3′ | ||||
Rev: 5′-GAAGGATCCTTAATGATGATGA | ||||
TGATGGATGAGAGTCTTTTCCAGTTCGCT-3′ | ||||
Annealing temperature: 60 °C (30 cycles) | pET26b(+) | NdeI/BamHI | pET[XKS1ΔL-His]f | E. coli BL21 (DE3) pET26b(+)[XKS1ΔL] 5.6 U/mg |
Fw: 5′ATACATATGGTTTGTTCA | ||||
GTAATTCAGAGA-3′ | ||||
Rev: 5′GAAGGATCCTTAATGATGATGAT | ||||
GATGGATGAGAGTCTTTTCCAGTTCGCT-3′ | ||||
Annealing temperature: 62 °C (30 cycles) | pET26b(+) | NdeI/BamHI | pET[XKS1V-His]g | E. coli BL21 (DE3) pET26b(+)[XKS1V-His] 3.4 U/mg |
N-terminal His-Tag.
Native XKS1.
C-terminal His-Tag.
C-terminal Strep-Tag.
N-terminal GST-Tag.
Leu1 deletion mutant; C-terminal His-Tag.
Mutant, where Leu1 was replaced by Val; C-terminal His-Tag.