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. 2011 Oct;79(2-2):223–230. doi: 10.1016/j.pep.2011.05.018

Table 1.

Cloning strategy for production of functional XKS1 in E. coli.

Primer (restriction sites in bold; mismatched bases in italic; tags underlined) Target plasmid Restriction sites Resulting plasmid Resulting strain/XK activity
Fw: 5′-CGCGGATCCTTGTGTT
CAGTAATTCAGAGACAGACAAG-3′
Rev: 5′-CGGGAATTCTTAGATGA
GAGTCTTTTCCAGTTCGCTTAAG-3′
Annealing temperature: 59 °C (30 cycles) pTrcHisA BamH1/EcoR1 pTrcHisA[XKS1]a E. coli Top 10 [pTrcHisAXKS1]/– U/mg



Fw: 5′CCGGAATTCTTGTGTTC
AGTAATTCAGAGACAGACAAG3′
Rev: 5′TTCTGCAGTTAGATGAG
AGTCTTTTCCAGTTCGCT3′
Annealing temperature: 59 °C (30 cycles) pTrc99A EcoR1/Pst1 pTrc99A[XKS1]b E. coli XL1-Blue [pTrc99AXKS1]/4.5 U/mg



Fw: 5′CCGGAATTCTTGTGTTCA
GTAATTCAGAGACAGACAAG3′
Rev: 5′-TTCTGCAGTTAATGATGAT
GATGATGATGGATGAGAGTCTTTTC
CAG TTCGCT-3′
Annealing temperature: 62 °C (30 cycles) pTrc99A EcoR1/Pst1 pTrc99A[XKS1His]c E. coli XL1-Blue pTrc99A[XKS1His]/3 U/mg



Fw: 5′-CCGGAATTCTTGTGTTCAG
TAATTCAGAGACAGACAAG3′
Rev: 5′-TTCTGCAGTTATTTTTCGA
ACTGCGGGTGGCTCCAAGCGCTG
ATGAGAGTCTTTTCCAGTTCGCT3′
Annealing temperature: 65 °C (30 cycles) pTrc99A EcoR1/Pst1 pTrc99A[XKS1Strep]d E. coli XL1-Blue pTrc99A[XKS1Strep]/2.3 U/mg



Fw: 5′-CGCGGATCCTTGTGTTCAG
TAATTCAGAGACAGACAAG-3′
Rev: 5′-CGGGAATTCTTAGATGAGA
GTCTTTTCCAGTTCGCTTAAG-3′
Annealing temperature: 59 °C (30 cycles) pGEX-6P-2 BamH1/EcoR1 pGEX[XKS1]e E. coli BL21 (DE3) pGEX[XKS1]/1.7 U/mg



Fw: 5′-ATACATATGTGTTCAGTAATTC
AGAGA-3′
Rev: 5′-GAAGGATCCTTAATGATGATGA
TGATGGATGAGAGTCTTTTCCAGTTCGCT-3′
Annealing temperature: 60 °C (30 cycles) pET26b(+) NdeI/BamHI pET[XKS1ΔL-His]f E. coli BL21 (DE3) pET26b(+)[XKS1ΔL] 5.6 U/mg



Fw: 5′ATACATATGGTTTGTTCA
GTAATTCAGAGA-3′
Rev: 5′GAAGGATCCTTAATGATGATGAT
GATGGATGAGAGTCTTTTCCAGTTCGCT-3′
Annealing temperature: 62 °C (30 cycles) pET26b(+) NdeI/BamHI pET[XKS1V-His]g E. coli BL21 (DE3) pET26b(+)[XKS1V-His] 3.4 U/mg
a

N-terminal His-Tag.

b

Native XKS1.

c

C-terminal His-Tag.

d

C-terminal Strep-Tag.

e

N-terminal GST-Tag.

f

Leu1 deletion mutant; C-terminal His-Tag.

g

Mutant, where Leu1 was replaced by Val; C-terminal His-Tag.