Table 5.
SNR | Samples | LOH type | CRP |
HMM (dChip) |
||
---|---|---|---|---|---|---|
TPR | FPR | TPR | FPR | |||
5.00 | NA10851 | CN = 1 | 0.9943 | 0.0013 | 0.9925 | 0.0256 |
CN = 2 | 0.9939 | 0.0014 | 0.9924 | 0.0230 | ||
NA12812 | CN = 1 | 0.9943 | 0.0013 | 0.9920 | 0.0248 | |
CN = 2 | 0.9940 | 0.0003 | 0.9921 | 0.0228 | ||
NA18605 | CN = 1 | 0.9925 | 0.0008 | 0.9917 | 0.0258 | |
CN = 2 | 0.9925 | 0.0008 | 0.9916 | 0.0249 | ||
2.00 | NA10851 | CN = 1 | 0.9906 | 0.0026 | 0.9936 | 0.0555 |
CN = 2 | 0.9950 | 0.0041 | 0.9932 | 0.0506 | ||
NA12812 | CN = 1 | 0.9955 | 0.0053 | 0.9932 | 0.0573 | |
CN = 2 | 0.9952 | 0.0035 | 0.9930 | 0.0543 | ||
NA18605 | CN = 1 | 0.9956 | 0.0070 | 0.9935 | 0.0515 | |
CN = 2 | 0.9939 | 0.0043 | 0.9929 | 0.0509 | ||
1.25 | NA10851 | CN = 1 | 0.9939 | 0.1469 | 0.9959 | 0.2790 |
CN = 2 | 0.9967 | 0.1054 | 0.9958 | 0.2414 | ||
NA12812 | CN = 1 | 0.9963 | 0.2312 | 0.9967 | 0.4088 | |
CN = 2 | 0.9991 | 0.1997 | 0.9975 | 0.3614 | ||
NA18605 | CN = 1 | 0.9940 | 0.1662 | 0.9967 | 0.3145 | |
CN = 2 | 0.9960 | 0.1431 | 0.9953 | 0.2707 |